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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009150251.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Family |
C2H2 |
Protein Properties |
Length: 170aa MW: 18827.7 Da PI: 10.1253 |
Description |
C2H2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009150251.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 14.9 | 7.9e-05 | 91 | 113 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
++Cp+Cg F+ L H+r+H
XP_009150251.1 91 HTCPICGLEFPMGQALGGHMRKH 113
79********************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 170 aa
Download sequence Send
to blast |
MVARSENLDQ TVEDTEATCL MLLSRVGECG RERGETRVFR CKTCMKEFSS FQALGGHRAS 60 HKKPVNNSSD EQSSSLSSGS VTKKTKKPLS HTCPICGLEF PMGQALGGHM RKHRNEKERG 120 ALVTRSFLPE AKFTTLKKSS SGKRVACFGM GLDPMERVIN LKLELGRTIY
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that may be involved in stress responses. {ECO:0000250}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By heat stress. {ECO:0000269|PubMed:18201973}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AB493639 | 5e-31 | AB493639.1 Arabidopsis thaliana At3g46070 gene for hypothetical protein, partial cds, clone: RAAt3g46070. |
GenBank | AL355775 | 5e-31 | AL355775.1 Arabidopsis thaliana DNA chromosome 3, BAC clone F12M12. |
GenBank | CP002686 | 5e-31 | CP002686.1 Arabidopsis thaliana chromosome 3, complete sequence. |
GenBank | DQ446739 | 5e-31 | DQ446739.1 Arabidopsis thaliana clone pENTR221-At3g46070 zinc finger family protein (At3g46070) mRNA, complete cds. |
GenBank | DQ653133 | 5e-31 | DQ653133.1 Arabidopsis thaliana clone 0000012225_0000008871 unknown mRNA. |