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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
XP_009150114.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
|
| Family |
LFY |
| Protein Properties |
Length: 417aa MW: 46506.2 Da PI: 6.7464 |
| Description |
LFY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_009150114.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | FLO_LFY | 610.8 | 2.7e-186 | 1 | 394 | 1 | 386 |
FLO_LFY 1 mdpeafsaslfkwdpraaaaapparlleeaavseapleaaaaaaarklreleelfkayGvryltvakiaelGftvstLvdmkdeelddlmkslse 95
mdpe f++ lf+w+p a++++p+ + + ++++++p++ ++aa ++l +le lf yGvr++t+akiaelGft+stLv+mkdeel+d+m+sls+
XP_009150114.1 1 MDPEGFTSGLFRWNPTRAMVQAPTAIPPPQQQQQSPATPQTAAFGMRLGGLEGLFGPYGVRFYTAAKIAELGFTASTLVGMKDEELEDMMNSLSH 95
9*************98888888889999999999998888888888899********************************************** PP
FLO_LFY 96 ifrldllvGeryGikaavraerrrlee..eeaekkrrkll...sedeet..aldalsqe....glseepvqeekeaagsggeglgeaelvaaeek 179
ifr++llvGeryGikaavraerrrl+e ee++++rr+ll + d+ t aldalsqe glseepvq++ ++ ++g + g+ + a ++
XP_009150114.1 96 IFRWELLVGERYGIKAAVRAERRRLQEeeEEESSRRRHLLlsaAGDSGThlALDALSQEddwtGLSEEPVQHQDHTDAAGINCGGRGGHWEAGQT 190
*************************995444567778877787455544569******988889******9976655554444344444443322 PP
FLO_LFY 180 kseeekkkaskkkqkrkkkkelkseededeeeeededeeg...sgedgeerqrehPfivtepgevargkknGLDYLfdLyeqCrefLlqvqkiak 271
+ kk++ + ++++k + + e+d+d +e ed+d+++ ++ +g+erqrehPfivtepgevargkknGLDYLf+LyeqCrefLlqvq+iak
XP_009150114.1 191 ---TIKKQQ-Q-RRRKKAIVT-SVETDDDGNEGEDDDGMDivnGSGSGMERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLLQVQTIAK 279
...222222.2.233333333.334445544444444444443667799********************************************** PP
FLO_LFY 272 erGekcPtkvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqgwdidavfnahprLs 366
+rGekcPtkvtnqvfryakk+ga+yinkPkmrhYvhCYalhcLdeeasnalrr+fkergenvG+wrqacykplv+ia r+gwdidavfnahprLs
XP_009150114.1 280 DRGEKCPTKVTNQVFRYAKKSGANYINKPKMRHYVHCYALHCLDEEASNALRRTFKERGENVGSWRQACYKPLVDIACRHGWDIDAVFNAHPRLS 374
*********************************************************************************************** PP
FLO_LFY 367 iWYvPtkLrqLChlerskas 386
iWYvPtkLrqLChler++a+
XP_009150114.1 375 IWYVPTKLRQLCHLERNNAV 394
****************9975 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 417 aa
Download sequence Send
to blast |
MDPEGFTSGL FRWNPTRAMV QAPTAIPPPQ QQQQSPATPQ TAAFGMRLGG LEGLFGPYGV 60
RFYTAAKIAE LGFTASTLVG MKDEELEDMM NSLSHIFRWE LLVGERYGIK AAVRAERRRL 120
QEEEEEESSR RRHLLLSAAG DSGTHLALDA LSQEDDWTGL SEEPVQHQDH TDAAGINCGG 180
RGGHWEAGQT TIKKQQQRRR KKAIVTSVET DDDGNEGEDD DGMDIVNGSG SGMERQREHP 240
FIVTEPGEVA RGKKNGLDYL FHLYEQCREF LLQVQTIAKD RGEKCPTKVT NQVFRYAKKS 300
GANYINKPKM RHYVHCYALH CLDEEASNAL RRTFKERGEN VGSWRQACYK PLVDIACRHG 360
WDIDAVFNAH PRLSIWYVPT KLRQLCHLER NNAVAAAAAL VGGISCEGSS ASGRFGV
|
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | DEVELOPMENTAL STAGE: Expressed at an early stage of floral initiation. |
| Uniprot | TISSUE SPECIFICITY: Acts in the floral primordia. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Controls floral meristem identity. Is required very early in flower development and may act here as a transcription factor. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | KR817799 | 0.0 | KR817799.1 Brassica juncea cultivar Varuna LEAFY (LFY) mRNA, complete cds. |
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT5G61850.1 | 0.0 | floral meristem identity control protein LEAFY (LFY) |
