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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009149785.1 |
Organism |
|
Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Family |
MYB |
Protein Properties |
Length: 258aa MW: 29421.2 Da PI: 8.6929 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009149785.1 | genome | NCBI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 45.3 | 2e-14 | 20 | 67 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g W++eEde+l +v + G +W+tI+ g+ R +k+c++rw +yl
XP_009149785.1 20 KGLWSPEEDEKLRSYVLKCGHVCWSTIPIQAGLQRNGKSCRLRWVNYL 67
678*****************99************************97 PP
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2 | Myb_DNA-binding | 51.9 | 1.7e-16 | 73 | 118 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+ ++T+eE+ l+ ++ lG++ W+ I+++++ gRt++++k++w++yl
XP_009149785.1 73 KSAFTKEEETTLLSLHSILGNK-WAHISKYLP-GRTDNEIKNYWHSYL 118
578*******************.*********.************997 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 258 aa
Download sequence Send
to blast |
MVCKSETSNR KLKSKEKQRK GLWSPEEDEK LRSYVLKCGH VCWSTIPIQA GLQRNGKSCR 60 LRWVNYLRPG LKKSAFTKEE ETTLLSLHSI LGNKWAHISK YLPGRTDNEI KNYWHSYLKK 120 SVPSTKHEST RTPQTHSITN SVKTLESTTG RSSSFINVGE SFSAKLSNFS PSVVFSEWLD 180 HSLVMDQLPQ THSYVQDHIV PEERGLAGTF GQRLYENSNS MVDYIPNSDF LLGDEIEFCT 240 SFSDSFLIDA LASEQRSM
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed at very low level. Expressed in cauline leaves. {ECO:0000269|PubMed:11581165}. |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that promotes photomorphogenesis in the light by participating in the transmission of phytochrome A (phyA) signals to downstream responses (PubMed:11581165, PubMed:19482971). Probably acts by activating expression of light-induced genes. In darkness, its degradation prevents the activation of light-induced genes (PubMed:11581165). {ECO:0000269|PubMed:11581165, ECO:0000269|PubMed:19482971}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By hormones or elicitors treatment. By exposure to abiotic stress. {ECO:0000269|PubMed:9839469}. |