 |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009148198.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Family |
C2H2 |
Protein Properties |
Length: 337aa MW: 38511.6 Da PI: 6.5786 |
Description |
C2H2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009148198.1 | genome | NCBI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 14.9 | 7.8e-05 | 169 | 188 | 1 | 20 |
EEETTTTEEESSHHHHHHHH CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20
++Cp C k+F+r n++ H+
XP_009148198.1 169 FSCPLCFKTFNRYNNMQMHM 188
89*****************9 PP
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2 | zf-C2H2 | 13.1 | 0.00029 | 253 | 275 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
+ C Cgk F k + ++H +++
XP_009148198.1 253 FACRRCGKAFAVKGDWRTHEKNC 275
78*****************9987 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 337 aa
Download sequence Send
to blast |
MSNPAYSNLF NNGFDNTNFN CSTSLSYIYN SHNSFYYPNT TNPNYMAPTT STFPNSPPLR 60 EALPLLSLSP IRHQEQQDQQ FMDTDQISSS KFLDYPHDVT VDLHLGLPNY GVGGSYIAHV 120 ATTDEQDDDQ GVEVTVDSHL HDDDDGDLHR DHHYWIPTPD QILMGPTQFS CPLCFKTFNR 180 YNNMQMHMWG HGSQYRKGPE SLRGTQPTGM LRLPCYCCAP GCKNNIDHPR TKPLKDFRTL 240 QTHYKRKHGS RPFACRRCGK AFAVKGDWRT HEKNCGKLWY CSCGSDFKHK RSLKDHVKAF 300 GNDHIPCAID NFGGDHEDYY EAASDIQQQD DCNTNEC
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcriptional regulator. {ECO:0000305|PubMed:20541552}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AJ311810 | 0.0 | AJ311810.2 Arabidopsis thaliana mRNA for WIP5 protein (At1g51220 gene). |