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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
XP_009147819.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
|
| Family |
ERF |
| Protein Properties |
Length: 203aa MW: 22265.8 Da PI: 9.7294 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_009147819.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 61.4 | 2.1e-19 | 21 | 71 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
++++GVr ++ +gr++AeIrdp++ + r++lg+f++a +Aa+a++aa+++l+g
XP_009147819.1 21 TRFRGVRKRP-WGRYAAEIRDPYK---KSRVWLGTFDSAVDAARAYDAAARNLRG 71
589*******.**********765...6*************************99 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 203 aa
Download sequence Send
to blast |
MRRGRVSTPV AANHNASIKE TRFRGVRKRP WGRYAAEIRD PYKKSRVWLG TFDSAVDAAR 60
AYDAAARNLR GPKAKTNFPI ESPPSPPRID PFMDHRLYAG ASSRPTSSSM SSTVESSSGQ 120
RSSAAKPLST TAKRYPRTPP VVPEDCHSDC GSSSSVIDDG DDDIASSSRR REPPPFKFDL 180
NFPPLDDVGL IDGVDDICTD LRL
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| Functional Description ? help
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| Source |
Description |
| UniProt | Acts as a transcriptional repressor. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways and could also regulate other AtERFs. {ECO:0000269|PubMed:10715325, ECO:0000269|PubMed:11487705, ECO:0000269|PubMed:9756931}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by jasmonate (JA), ethylene and Alternaria brassicicola (locally and systemically). Moderate induction by wounding or drought stress does not require EIN2, whereas induction by NaCl does. Transcripts accumulate slightly in cycloheximide-treated plants, a protein synthesis inhibitor. Seems to not be influenced by ethylene, exogenous abscisic acid (ABA), cold and heat stress. {ECO:0000269|PubMed:10715325, ECO:0000269|PubMed:12805630}. |
