 |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009147443.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
|
Family |
MYB |
Protein Properties |
Length: 205aa MW: 23600.7 Da PI: 9.843 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009147443.1 | genome | NCBI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 51.2 | 2.9e-16 | 25 | 72 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT eEd++l +++ +G g W+++a+ g++Rt+k+c++rw++yl
XP_009147443.1 25 KGPWTMEEDLILFNYILNHGEGLWNSVAKASGLKRTEKSCRLRWLNYL 72
79********************************************97 PP
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2 | Myb_DNA-binding | 58.3 | 1.8e-18 | 78 | 121 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
rg+ T+eE++l+++++++lG++ W++Ia++++ gRt++++k++w++
XP_009147443.1 78 RGNITAEEHLLIIQLHAKLGNR-WSKIAKYLP-GRTDNEIKNFWRT 121
7999******************.*********.***********96 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 205 aa
Download sequence Send
to blast |
MDTKKTGIKK ERIPSQKEEE GTVRKGPWTM EEDLILFNYI LNHGEGLWNS VAKASGLKRT 60 EKSCRLRWLN YLRPDVRRGN ITAEEHLLII QLHAKLGNRW SKIAKYLPGR TDNEIKNFWR 120 TKIQRHVKMS SSKNTNNIRH CLGNSQSSVI TATDQGSSSK GLISPATTTT SFHVMEQSND 180 SYWNVEDIWP LQLLNDDLND DHQVI
|
Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed specifically in flowers. {ECO:0000269|PubMed:19325888}. |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor acting redundantly with MYB21 and MYB24 to control stamen filament elongation in the late developed flowers. Repressed at the transcript levels by DELLA proteins. {ECO:0000269|PubMed:19325888}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK118091 | 1e-153 | AK118091.1 Arabidopsis thaliana At3g01530 mRNA for putative transcription factor, complete cds, clone: RAFL19-34-G03. |
GenBank | BT005574 | 1e-153 | BT005574.1 Arabidopsis thaliana clone U50886 putative myb family transcription factor (At3g01530) mRNA, complete cds. |