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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
XP_009147148.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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| Family |
bHLH |
| Protein Properties |
Length: 234aa MW: 25484.2 Da PI: 12.134 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_009147148.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 13.2 | 0.00016 | 172 | 206 | 16 | 55 |
HHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 16 iNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+N + L +l+P + kK s iLe+A++YI+ L+
XP_009147148.1 172 VNRKVRSLGRLVPGC-----KKESVPVILEEATDYIQALE 206
577777888888888.....899**************985 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 234 aa
Download sequence Send
to blast |
MASLFSDNEQ PPTNSNSSST VLVRKKKSLS ASSPSSSRGN AASLPTRDGD SHPRWRSEKQ 60
QRIYSAKLIQ ALKQVRLSSS SSATTSSPTA HKRGKAVREA ADRALAVSAR GRTLWSRAIL 120
ANRIKLKFRK QKRPRQTVIP AVTTVVTTGA SSRGRKRRVS VVRLNKKSLP TVNRKVRSLG 180
RLVPGCKKES VPVILEEATD YIQALEMQVR AMNSLVELLS GYSTPGSDSA PPPI
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| Functional Description ? help
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| Source |
Description |
| UniProt | bHLH transcription factor that binds DNA on specific sequence 5'-CANNTG-3' in target gene promoters (PubMed:24009530). Negatively regulates brassinosteroid signaling (PubMed:20023194). Together with BHLH148/RITF1, regulates the transcription of several genes involved in the detoxification of reactive oxygen species (ROS) generated by salt (NaCl) stress. Confers tolerance to salt and to the oxidative stress-inducing reagents hydrogen peroxide H(2)O(2) and methyl viologen (MV) (PubMed:24009530). {ECO:0000269|PubMed:20023194, ECO:0000269|PubMed:24009530}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Slightly induced by salt (NaCl) stress. {ECO:0000269|PubMed:24009530}. |
| Publications
? help Back to Top |
- Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature.
Differentiation, 2010. 80(1): p. 1-8
[PMID:20219281] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Sukweenadhi J, et al.
Paenibacillus yonginensis DCY84(T) induces changes in Arabidopsis thaliana gene expression against aluminum, drought, and salt stress.
Microbiol. Res., 2015. 172: p. 7-15
[PMID:25721473]
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