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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009146116.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Family |
M-type_MADS |
Protein Properties |
Length: 368aa MW: 42119.3 Da PI: 9.2871 |
Description |
M-type_MADS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009146116.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SRF-TF | 69.9 | 2.3e-22 | 25 | 71 | 5 | 51 |
SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
SRF-TF 5 nksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
+s + ++++kR+ +++KKA ELS+LC++ev+vi+++s+g+l+++++
XP_009146116.1 25 TSSLKATSLAKRQVTVFKKARELSILCGIEVCVIYYGSDGELKTWPK 71
578899***************************************96 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 368 aa
Download sequence Send
to blast |
MSSSSLACLP SSSSSQIRQN HFQKTSSLKA TSLAKRQVTV FKKARELSIL CGIEVCVIYY 60 GSDGELKTWP KDREKVKDMA RRYSQLSDMK RRKGQDDLDK FLKKINKEDS KKKKKMKKVK 120 VESSCKYPDW DPRFDNCSVE QLTELIQSLE HSETKLQHRL RGAVESQRQR NMYYTTMTGQ 180 EQMNHLQQHS NQVSMDQYNH GPGTLPQLPV STSAFNQSQS LAPLPNSLTI HQNPNMESYS 240 RLLGVQETGM NELLSMNMLP YNNINTNNVN VFPNQFHQNS YNMEDYSGFL GVQETGINNM 300 SSEDYSGLLW TQGTGINGLQ NMDMFGYNNN SNNNAYGFSH HQPVQYPGQR APLGFQYMDR 360 STQNIRPL
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 90 | 116 | RRKGQDDLDKFLKKINKEDSKKKKKMK |
2 | 101 | 117 | LKKINKEDSKKKKKMKK |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that may function in the maintenance of the proper function of the central cell in pollen tube attraction. {ECO:0000305|PubMed:26462908}. |