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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009145268.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Family |
CPP |
Protein Properties |
Length: 673aa MW: 74079.6 Da PI: 7.0563 |
Description |
CPP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009145268.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | TCR | 51.3 | 2.3e-16 | 383 | 421 | 2 | 40 |
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40
++k+CnCkkskClk+YCeCfaag++C e C+C dC+N+
XP_009145268.1 383 SCKRCNCKKSKCLKLYCECFAAGVYCIEPCSCVDCFNRP 421
689**********************************75 PP
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2 | TCR | 52.8 | 7.9e-17 | 468 | 507 | 1 | 40 |
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40
++k+gCnCkks+ClkkYCeCf++g+ Cs +C+Ce+CkN
XP_009145268.1 468 RHKRGCNCKKSNCLKKYCECFQSGVGCSINCRCEGCKNAF 507
589***********************************75 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009934 | Biological Process | regulation of meristem structural organization |
GO:0048444 | Biological Process | floral organ morphogenesis |
GO:0051302 | Biological Process | regulation of cell division |
GO:0005634 | Cellular Component | nucleus |
Sequence ? help Back to Top |
Protein Sequence Length: 673 aa
Download sequence Send
to blast |
MDNSQKKKIE TPTPKSKFED SPVFNYINNL SPIEAVRSIP TVQTFNSLSF TSPPPVFTSP 60 HASFHRESRF FRCHNSVERS KALESLDRSV STQEVVVASG EVDLNKEATL EDQEEETSCD 120 RVDSPGTGDI VTQVLLDPSG GAPQGEDDGS SSQDVSVGLR KILDAQKENG TPRLMADAAE 180 LLVFRSPNDS EAFGCLVDKI SSSERRFCAG VKLTKHRDIT KDVPANDNQP LAVVPNQLVS 240 NLHRGSMRRR CLDFEVLGKR KKDIADDDQQ TVGDNKAESS SKCVVPGIGL HLNAIAMASR 300 GIKINTIHED STSVEIQKSF LGSTTPVQSQ DIMRETLDQA ESEPGKGLAV EEETLKPLVF 360 EELNQDSLQK KKRKVEEPGE GDSCKRCNCK KSKCLKLYCE CFAAGVYCIE PCSCVDCFNR 420 PIHEDTVLAT RKQIESRNPL AFAPKVIRNS DSIMETSDDA SKTPASARHK RGCNCKKSNC 480 LKKYCECFQS GVGCSINCRC EGCKNAFGKK DAYLLAIMES KQEEDLSKIQ QNSDLSKEVE 540 QNHPSSDQPS TPLPPYRHMV VHQPFLSKNR LPPTQFFLGA GSSSFRKPDG DLAQARIEKK 600 PLETVTEDKT EIMPEILSNT PITTVKAISP NSKRVSPPHI GSSESGSILG KRTNGRKLIL 660 RSIPAFPSLN PNQ
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 247 | 261 | RRRCLDFEVLGKRKK |
2 | 369 | 374 | KKKRKV |
Expression --
Description ? help
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Source |
Description |
Uniprot | DEVELOPMENTAL STAGE: Expressed at the first stage of pollen development in uninucleate microspores and bicellular pollen but not in tricellular and mature pollen. {ECO:0000269|PubMed:18057042}. |
Uniprot | TISSUE SPECIFICITY: Ubiquitous but expressed mostly in flowers with highest levels in developing ovules and microspores. {ECO:0000269|PubMed:10769244, ECO:0000269|PubMed:10769245, ECO:0000269|PubMed:18057042}. |
Functional Description ? help
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Source |
Description |
UniProt | Probable floral-specific cell division component, required for proper organ formation in flowers. Regulates the floral meristem cell division and the inflorescence meristem organization. Plays a role in development of both male and female reproductive tissues. {ECO:0000269|PubMed:10769244, ECO:0000269|PubMed:10769245, ECO:0000269|PubMed:9043081, ECO:0000269|PubMed:9725857}. |
Publications
? help Back to Top |
- Lu T,Dou Y,Zhang C
Fuzzy clustering of CPP family in plants with evolution and interaction analyses. BMC Bioinformatics, 2013. 14 Suppl 13: p. S10 [PMID:24268301] - Xie W, et al.
Exploring potential new floral organ morphogenesis genes of Arabidopsis thaliana using systems biology approach. Front Plant Sci, 2015. 6: p. 829 [PMID:26528302] - Wang W,Sijacic P,Xu P,Lian H,Liu Z
Arabidopsis TSO1 and MYB3R1 form a regulatory module to coordinate cell proliferation with differentiation in shoot and root. Proc. Natl. Acad. Sci. U.S.A., 2018. 115(13): p. E3045-E3054 [PMID:29535223]
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