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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009144630.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Family |
bHLH |
Protein Properties |
Length: 290aa MW: 30890.1 Da PI: 6.8048 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009144630.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 27.2 | 6.9e-09 | 135 | 179 | 5 | 54 |
HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
HLH 5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
h+++Er RR+ri +++ L+el+P+ + K + a++ + v+Y+k L
XP_009144630.1 135 HSIAERLRRERIAERIRALQELVPTvN------KTDRAAMIDEIVDYVKFL 179
99***********************55......9**************998 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 290 aa
Download sequence Send
to blast |
TPSDDFFDQI LGLPNFPASS ATGLFGGLGG GGGAPPMMLQ VGSGEEGSGF HSQMFPLGLS 60 LEQGKGPGVL RPEGGGGLGS GKQFSDDVLD HPSSSMKPVF PGQPMQQPAP SAPPHQPTSI 120 RPRVRARHGQ ATDPHSIAER LRRERIAERI RALQELVPTV NKTDRAAMID EIVDYVKFLR 180 LQVKVWSMSR LGGAGAVAPL VTDMPLPSSV EDEGSEGGRT PQAAWEKGSN DGTERQVAKL 240 MEKNVWAAMQ LLQSKTLCMM PISLAMAIYH SQPPDTSSSV VKPETNPPRP
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed constitutively in roots, leaves, stems, and flowers. {ECO:0000269|PubMed:12679534}. |
Functional Description ? help
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Source |
Description |
UniProt | Required for ovule fertilization. {ECO:0000269|PubMed:15634699}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK352765 | 0.0 | AK352765.1 Thellungiella halophila mRNA, complete cds, clone: RTFL01-02-G01. |