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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009143406.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Family |
Trihelix |
Protein Properties |
Length: 292aa MW: 34855.1 Da PI: 6.806 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009143406.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 81.1 | 1.6e-25 | 39 | 121 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
+W+ +e+++Li++r e+++++ ++k++k lWe vs+kmr++ f rsp+qCk+kw+nl +r+k +++++++ +++++p++d+++
XP_009143406.1 39 QWSLEETKELIAIRGELDQTFMETKRNKLLWEVVSNKMRDKSFLRSPEQCKCKWKNLVTRFKGCETMDEEI---ARQQFPFYDDMQ 121
7********************************************************************97...45679*****96 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 292 aa
Download sequence Send
to blast |
MDQHQLHQLH YLNKHHHQLH PQSQTPELAS PATGDRFPQW SLEETKELIA IRGELDQTFM 60 ETKRNKLLWE VVSNKMRDKS FLRSPEQCKC KWKNLVTRFK GCETMDEEIA RQQFPFYDDM 120 QIIFASRMQR MLWAESEGGG GTSGATRKRS HSEQFSSDEE EENVNEELVG ISNESKTLNP 180 EKNIAKKRKG GISNSSGGAN NNVREVLDEF MRHQMRMENE WRERWEAREK ERAEKEEEWR 240 RKMEELEKER MAMERMWRDR EEQRRSREEL RAEKRDSLIN TLLAKLTRDG SL
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that may play a role in the induction of CAM4 in response to pathogen and salt. {ECO:0000269|PubMed:15310827}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By salt and infection with the bacterial pathogen P.syringae pv tomato. {ECO:0000269|PubMed:15310827}. |