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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009140890.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Family |
NAC |
Protein Properties |
Length: 193aa MW: 22791.4 Da PI: 4.4573 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009140890.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 92.6 | 6.7e-29 | 17 | 138 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95
lppGfrF+P de+lv eyL+kkv ++++++ ++e++ ++v+PwdL +++e+y+F+k+++++ +k r t sgyW++ + +ev+++
XP_009140890.1 17 LPPGFRFDPDDEDLVFEYLAKKVLHRPMDF--DLPELRSCNVDPWDLL---GDKNTEMYYFVKKEERE----KKGRETLSGYWEECEE-EEVMES 101
79*************************999..49*************6...55778*******99976....6789999*****8866.667776 PP
NAM 96 ....kgelvglkktLvfykgrapkgektdWvmheyrl 128
+ l g kkt++fy g++p+g+ t W+ e+rl
XP_009140890.1 102 gdrgCNYLEGRKKTFAFYIGQRPRGTITPWIKYEFRL 138
454444559**************************97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 193 aa
Download sequence Send
to blast |
MDISTQRFSM NGRSMRLPPG FRFDPDDEDL VFEYLAKKVL HRPMDFDLPE LRSCNVDPWD 60 LLGDKNTEMY YFVKKEEREK KGRETLSGYW EECEEEEVME SGDRGCNYLE GRKKTFAFYI 120 GQRPRGTITP WIKYEFRLLS SRATRWSSSS LPRGAVENWR AVKVIVKEEN EEEIEEDEQA 180 SDESDGEEVV QSR
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 3e-17 | 15 | 139 | 15 | 143 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 3e-17 | 15 | 139 | 15 | 143 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 3e-17 | 15 | 139 | 15 | 143 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 3e-17 | 15 | 139 | 15 | 143 | NO APICAL MERISTEM PROTEIN |
3swm_A | 4e-17 | 15 | 139 | 18 | 146 | NAC domain-containing protein 19 |
3swm_B | 4e-17 | 15 | 139 | 18 | 146 | NAC domain-containing protein 19 |
3swm_C | 4e-17 | 15 | 139 | 18 | 146 | NAC domain-containing protein 19 |
3swm_D | 4e-17 | 15 | 139 | 18 | 146 | NAC domain-containing protein 19 |
3swp_A | 4e-17 | 15 | 139 | 18 | 146 | NAC domain-containing protein 19 |
3swp_B | 4e-17 | 15 | 139 | 18 | 146 | NAC domain-containing protein 19 |
3swp_C | 4e-17 | 15 | 139 | 18 | 146 | NAC domain-containing protein 19 |
3swp_D | 4e-17 | 15 | 139 | 18 | 146 | NAC domain-containing protein 19 |
4dul_A | 3e-17 | 15 | 139 | 15 | 143 | NAC domain-containing protein 19 |
4dul_B | 3e-17 | 15 | 139 | 15 | 143 | NAC domain-containing protein 19 |
Search in ModeBase |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KF974765 | 0.0 | KF974765.1 Brassica napus NAC transcription factor 97-1 (NAC97-1.1) mRNA, complete cds. |