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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009139952.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Family |
M-type_MADS |
Protein Properties |
Length: 367aa MW: 42316.1 Da PI: 8.0462 |
Description |
M-type_MADS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009139952.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SRF-TF | 61.4 | 1.1e-19 | 15 | 63 | 2 | 50 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
+++++s + +++ R+ +++KKA+EL +LCd+e++vi ++++g+l++++
XP_009139952.1 15 SSSSYSLAATSLNSRLLTVFKKAQELTTLCDIEACVIHYGPDGELKTWP 63
799*********************************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 367 aa
Download sequence Send
to blast |
MRPPRPSPSS KCSSSSSSYS LAATSLNSRL LTVFKKAQEL TTLCDIEACV IHYGPDGELK 60 TWPEDRDKVR SLALRYIQLD QDKRRKKSIN LYEFLNKMKD KKKMINSFKK KAKRNVEELK 120 YPISHHYSPY QINQLIQSLE LSYSTLQERR RFLAAKANLE DRQHSFNPSQ FTQESVLKNQ 180 ELCVNVKNNN SFQHLCVSDY STVQESALRY HSMLYGGTYD QNMMCMGNIN NVQHPWLSNA 240 HPPELQEPNQ LMQHELNYGF DQNMLCMGDT TNSFSVVDPC LPNMLPDDFC FDFQDPYGGN 300 MVGNPSFSQV FFSRHVFKLC LWEPTTSGVY STISLAPTLL TKTLRFQAIY LMITESEAVY 360 ASACFYF
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that may function in the maintenance of the proper function of the central cell in pollen tube attraction. {ECO:0000305|PubMed:26462908}. |