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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009136642.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Family |
HSF |
Protein Properties |
Length: 270aa MW: 31281.6 Da PI: 6.1889 |
Description |
HSF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009136642.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HSF_DNA-bind | 109.5 | 2.4e-34 | 30 | 121 | 2 | 102 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96
Fl k++ei+ed+++++++sw++ g+sfvv+d ++f++ +Lp++Fkhsnf+SFvRQLn+YgF+k++ e+ weF+++ F g+++ll++
XP_009136642.1 30 FLIKTFEIVEDPNTDHIVSWNRGGTSFVVWDLHSFSEFLLPRHFKHSNFSSFVRQLNTYGFRKIEAER---------WEFANEGFLLGQRHLLKS 115
9****************************************************************999.........****************** PP
XXXXXX CS
HSF_DNA-bind 97 ikrkks 102
ikr++s
XP_009136642.1 116 IKRRAS 121
***976 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 270 aa
Download sequence Send
to blast |
MNPFLLQENV PPPSPPKPIE GLHEIGPPPF LIKTFEIVED PNTDHIVSWN RGGTSFVVWD 60 LHSFSEFLLP RHFKHSNFSS FVRQLNTYGF RKIEAERWEF ANEGFLLGQR HLLKSIKRRA 120 SFALSSSSIQ DPCVELRKEK QLLLMELVSL RQQQETNKSY IRAMEQRIEG AERKQRKMMS 180 FLARAMQSPS FLHQLLKQRD MRVKELEDEA AERGRGSSVS ELEALALEMQ GYGKQKNVKE 240 EEDMVVEREL DDGFWEELLS NESLASTSSN
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that specifically binds DNA sequence 5'-AGAAnnTTCT-3' known as heat shock promoter elements (HSE). |