 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_009135899.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
|
| Family |
Trihelix |
| Protein Properties |
Length: 339aa MW: 39220 Da PI: 4.4874 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_009135899.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 38.6 | 2.8e-12 | 93 | 174 | 5 | 86 |
trihelix 5 qevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
qe + +e+ ++ +l+r++l+ +W ev++k+ +e ers +qC+ +nl+++ykk++ k ss++++f++++
XP_009135899.1 93 QEAFVVLEVWGDRFLQLGRRSLRNEDWNEVAEKVsEELRSERSETQCRRMVDNLKRKYKKERVKVDKL-GLGSSKWSFFNKMD 174
667777888888888999****************777889*********************9998886.78899********8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 339 aa
Download sequence Send
to blast |
MGDSEDETGY PKKFYPLNRQ THPMYTRPIP KRHAYYHEEE DEEEDQEDDV GVGGVGGGGG 60
YSHRERFQKR LKPTKPVPGY DFGSGPSETK AEQEAFVVLE VWGDRFLQLG RRSLRNEDWN 120
EVAEKVSEEL RSERSETQCR RMVDNLKRKY KKERVKVDKL GLGSSKWSFF NKMDMLLGGG 180
GSSAKPEFGL ACGVDSGEFV FMNTKVYLEK SNGFDEMMDS PGDSEEDDDE EEEVEYERRR 240
KKGDDAASYK LLAESVERFG KVYEKMERSK KEQMKELEKM RGEFQRDLEL QKKQIVERAQ 300
SEIARLREEE EENETHHDDD GGESEDEGME NDSDVNLSD
|
