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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009134422.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Family |
bHLH |
Protein Properties |
Length: 309aa MW: 32774 Da PI: 6.5171 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009134422.1 | genome | NCBI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 27.1 | 7.6e-09 | 155 | 199 | 5 | 54 |
HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
HLH 5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
h+++Er RR+ri +++ L+el+P+ + K + a++ + v+Y+k L
XP_009134422.1 155 HSIAERLRRERIAERIRALQELVPTvN------KTDRAAMIDEIVDYVKFL 199
99***********************55......9**************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009567 | Biological Process | double fertilization forming a zygote and endosperm |
GO:0031347 | Biological Process | regulation of defense response |
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 309 aa
Download sequence Send
to blast |
MASNNNPHEN LSDQTPSDDF FDQILGLPNF SASSSDGGLG GGGGGGAPPM MLQLGSGEEG 60 SHMAGLVGGS GPSVFHNQMF PLGLSLDQGK GPVFLRPEGG GVHATVNRSS SSSSSMKGPV 120 FHGQPMQQPA PAAPHQPTSI RPRVRARRGQ ATDPHSIAER LRRERIAERI RALQELVPTV 180 NKTDRAAMID EIVDYVKFLR LQVKVLSMSR LGGAGAVAPL VTDMPLSSSV EDETSDGGRT 240 PQPAWEKWSN DGTERQVAKL MEENVGAAMQ LLQSKALCMM PISLAMAIYH SQPPDTSSVV 300 KPETNPPPQ
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed constitutively in roots, leaves, stems, and flowers. {ECO:0000269|PubMed:12679534}. |
Functional Description ? help
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Source |
Description |
UniProt | Required for ovule fertilization. {ECO:0000269|PubMed:15634699}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK352765 | 0.0 | AK352765.1 Thellungiella halophila mRNA, complete cds, clone: RTFL01-02-G01. |