 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
XP_009133914.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
|
Family |
EIL |
Protein Properties |
Length: 571aa MW: 65061.7 Da PI: 5.9576 |
Description |
EIL family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009133914.1 | genome | NCBI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | EIN3 | 500.4 | 8.9e-153 | 48 | 428 | 1 | 354 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWW 95
+el++rmw+d+m+lkrlke++ + + ke +k++++s+eqarrkkmsraQDgiLkYMlk+mevc+aqGfvYgiipekgkpv+gasd+Lr+WW
XP_009133914.1 48 DELERRMWRDKMRLKRLKEQQSK-C--KEGVDASKQQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWW 139
79******************998.4..56644567789********************************************************* PP
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT- CS
EIN3 96 kekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdq 190
k+kv+fdrngpaai+kyqa+n+i++g++++++ ++h+l+elqDTtlgSLLsalmqhcdppqrrfplekgv+pPWWP+G+e+ww++lgl+ dq
XP_009133914.1 140 KDKVRFDRNGPAAIAKYQAENNIAGGSNDCNSLVGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPNGREEWWPQLGLPSDQ 234
*******************************99************************************************************** PP
-.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX....XXXXXXXXXXXXXXXX CS
EIN3 191 gtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss....slrkqspkvtlsceqk 281
ppykkphdlkkawkv+vLtavikhmsp+i++ir+l+rqsk+lqdkm+akes+++l+++nqee +++++++s s++ +s ++ +++ ++
XP_009133914.1 235 ASPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEVVARELYPESClplsSSSVGSGSLLINDCSE 329
*************************************************************************5554545556************ PP
XXXX..XXXXXX.XXXXXXXXXX........................XXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXX CS
EIN3 282 edve..gkkeskikhvqavktta........................gfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsis 350
+dve k++++ +v++ k + ++v + ++k++ + + ++ ++ tc++ q+++s+ +l+f+d++s++
XP_009133914.1 330 YDVEcfDKEQQQSFDVEELKPEIvvsmnhptsfgicrmqqfpvkeevVATVGNLKRKQNNDLNVMMMERPGFTCENGQCPHSKINLGFQDRSSRD 424
****954444444578888877699******************9998555555555566777777777788************************ PP
XXXX CS
EIN3 351 qney 354
++++
XP_009133914.1 425 NHQM 428
**96 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009723 | Biological Process | response to ethylene |
GO:0042742 | Biological Process | defense response to bacterium |
GO:0071281 | Biological Process | cellular response to iron ion |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 571 aa
Download sequence Send
to blast |
MMMFNEMGMY GNMDLFSSTS LGETDVCPFP KDHPVVEDDY TDDEVDVDEL ERRMWRDKMR 60 LKRLKEQQSK CKEGVDASKQ QRQSQEQARR KKMSRAQDGI LKYMLKMMEV CKAQGFVYGI 120 IPEKGKPVTG ASDNLREWWK DKVRFDRNGP AAIAKYQAEN NIAGGSNDCN SLVGPTPHTL 180 QELQDTTLGS LLSALMQHCD PPQRRFPLEK GVPPPWWPNG REEWWPQLGL PSDQASPPYK 240 KPHDLKKAWK VGVLTAVIKH MSPDIAKIRK LVRQSKCLQD KMTAKESATW LAIINQEEVV 300 ARELYPESCL PLSSSSVGSG SLLINDCSEY DVECFDKEQQ QSFDVEELKP EIVVSMNHPT 360 SFGICRMQQF PVKEEVVATV GNLKRKQNND LNVMMMERPG FTCENGQCPH SKINLGFQDR 420 SSRDNHQMVC PYRDNRLAYG VKPVVVSQQS QPFPQPVQPV DLSGYGVPKN GQKMITELMA 480 MYDRNVQSSQ ASNQSMISDS TAAQNYQEQQ LCFNRNQMFM QQGNSEINNQ SQMVFDSTSF 540 DIASFDYKND WQAGVMEGMG KQQQQDVSIW F
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Probable transcription factor acting as a positive regulator in the ethylene response pathway. Could bind the primary ethylene response element present in the ETHYLENE-RESPONSE-FACTOR1 promoter. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AC189333 | 0.0 | AC189333.2 Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB038M13, complete sequence. |
Publications
? help Back to Top |
- Duarte JM, et al.
Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546] - Kim HG, et al.
GDSL LIPASE1 modulates plant immunity through feedback regulation of ethylene signaling. Plant Physiol., 2013. 163(4): p. 1776-91 [PMID:24170202] - Zhang GB,Yi HY,Gong JM
The Arabidopsis ethylene/jasmonic acid-NRT signaling module coordinates nitrate reallocation and the trade-off between growth and environmental adaptation. Plant Cell, 2014. 26(10): p. 3984-98 [PMID:25326291] - Wang J, et al.
Arabidopsis ROOT HAIR DEFECTIVE3 is involved in nitrogen starvation-induced anthocyanin accumulation. J Integr Plant Biol, 2015. 57(8): p. 708-21 [PMID:25494721] - Qing D, et al.
Quantitative and Functional Phosphoproteomic Analysis Reveals that Ethylene Regulates Water Transport via the C-Terminal Phosphorylation of Aquaporin PIP2;1 in Arabidopsis. Mol Plant, 2016. 9(1): p. 158-174 [PMID:26476206] - Poulios S,Vlachonasios KE
Synergistic action of histone acetyltransferase GCN5 and receptor CLAVATA1 negatively affects ethylene responses in Arabidopsis thaliana. J. Exp. Bot., 2016. 67(3): p. 905-18 [PMID:26596766] - Shen X,Li Y,Pan Y,Zhong S
Activation of HLS1 by Mechanical Stress via Ethylene-Stabilized EIN3 Is Crucial for Seedling Soil Emergence. Front Plant Sci, 2016. 7: p. 1571 [PMID:27822221] - Abozeid A, et al.
Ethylene Improves Root System Development under Cadmium Stress by Modulating Superoxide Anion Concentration in Arabidopsis thaliana. Front Plant Sci, 2017. 8: p. 253 [PMID:28286514] - Feng Y, et al.
Ethylene promotes root hair growth through coordinated EIN3/EIL1 and RHD6/RSL1 activity in Arabidopsis. Proc. Natl. Acad. Sci. U.S.A., 2017. 114(52): p. 13834-13839 [PMID:29233944] - Harkey AF, et al.
Identification of Transcriptional and Receptor Networks That Control Root Responses to Ethylene. Plant Physiol., 2018. 176(3): p. 2095-2118 [PMID:29259106]
|