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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
XP_009133063.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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| Family |
E2F/DP |
| Protein Properties |
Length: 430aa MW: 47372 Da PI: 4.6917 |
| Description |
E2F/DP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_009133063.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | E2F_TDP | 81.4 | 7.8e-26 | 113 | 178 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71
r+++sL+llt+kf++l++++e+g+++ln++a+ L +v ++RRiYDi+NVLe+++liek kn+i wkg
XP_009133063.1 113 RYDSSLGLLTKKFVNLIKQAEDGMLDLNKAAEVL---EV--QKRRIYDITNVLEGIDLIEKPFKNRILWKG 178
6899******************************...99..****************************98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0051446 | Biological Process | positive regulation of meiotic cell cycle |
| GO:0005667 | Cellular Component | transcription factor complex |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 430 aa
Download sequence Send
to blast |
MGLGMRWREC GSTFGGRRMN MVRDKKHKGK KSRKRKSMMD VVTTTTTTSN SNGFTSTGST 60
SIHNSPCLTP VSAKGGRVNT KSRAKGTQSL PQTPISNAVV GSPATLTPSG SCRYDSSLGL 120
LTKKFVNLIK QAEDGMLDLN KAAEVLEVQK RRIYDITNVL EGIDLIEKPF KNRILWKGVD 180
ASRPGDVDAD VSVLHAEIEN LNLEEQALDS QIRETEERLR DLSENEKNQK WLFVTEEDIK 240
SLPGFQNQTL IAVKAPHGTT LEVPDPDEAG DLPQRRYRII LRSTMGPIDV YLVSEFEDTN 300
GSVAPPACLP PIASCSGSTE NHDIEALTLD NTETTIEHQM SQDHEHAQPG DTSDLNYLQE 360
QVGGMLKITP SDIENDDTDY WLLSNAEISM TDIWNTDSGI DWDYGIADVS TPPPVMGEEI 420
APVAIDSKPR
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | DEVELOPMENTAL STAGE: Expressed in a cell cycle-dependent manner. Most abundant in early S phase. Decreased expression during the passage into G2. {ECO:0000269|PubMed:11108847, ECO:0000269|PubMed:11669580, ECO:0000269|PubMed:11786543}. |
| Uniprot | TISSUE SPECIFICITY: Highly expressed in the shoot apical meristem, emerging leaf primordia, and vascular tissues of young leaf primordia. Expressed in flowers, in epidermis and cortex of hypocotyls, and at lower levels in leaves. {ECO:0000269|PubMed:11108847, ECO:0000269|PubMed:11889041}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription activator that binds DNA cooperatively with DP proteins through the E2 recognition site, 5'-TTTC[CG]CGC-3' found in the promoter region of a number of genes whose products are involved in cell cycle regulation or in DNA replication. The binding of retinoblastoma-related proteins represses transactivation. Regulates gene expression both positively and negatively. Activates the expression of E2FB. Involved in the control of cell-cycle progression from G1 to S phase. Stimulates cell proliferation and delays differentiation. {ECO:0000269|PubMed:11669580, ECO:0000269|PubMed:11786543, ECO:0000269|PubMed:11862494, ECO:0000269|PubMed:11889041, ECO:0000269|PubMed:11891240, ECO:0000269|PubMed:12913157, ECO:0000269|PubMed:15377755, ECO:0000269|PubMed:16514015, ECO:0000269|PubMed:19662336}. |
