 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
XP_009133021.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
|
| Family |
bZIP |
| Protein Properties |
Length: 395aa MW: 42512 Da PI: 6.416 |
| Description |
bZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_009133021.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | bZIP_1 | 60.2 | 4.4e-19 | 289 | 351 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
e+elkr+rrkq NReAA+rsR+RK+ae ++L++ ++L+aeN +L+ e+++lk + ++l+se+
XP_009133021.1 289 ERELKRQRRKQTNREAAQRSRLRKEAEFDQLAQYTEVLSAENASLRAEMNRLKSQREELTSEN 351
89***********************************************************98 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 395 aa
Download sequence Send
to blast |
MASSEMEKPS KEKELKQPSS SSSAPPPSQE PSSSVSAGPD WSGFQASPAP MQPHGFVTSS 60
PQPHPYMWGV QHMMPPYGTP PHPYVTMYPP GGMYAHPSMP PGSYPYSPMP SPNGVTEASG 120
NTTGGTEGDS KRSDVKEKLP IRRSKRILSM MKGKNNEPGK NSGASANVAY SKSGESDSDG 180
SSEGSDANYQ IDLGSSQDGK DAASENGGSA NGLQNGSVGT PLPTVSQKVP IMSKTAPGVP 240
GQPTNINIGM GYWGAPIPGM HGKVSTPVPG VFAQMSRDGG HSQPWLQDER ELKRQRRKQT 300
NREAAQRSRL RKEAEFDQLA QYTEVLSAEN ASLRAEMNRL KSQREELTSE NTSLKDLLLS 360
FPPLEGINMD KDDQEPDTNQ TCFTETKFVS YKDST
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator that binds to the G-box motif (5'-CACGTG-3') and other cis-acting elements with 5'-ACGT-3' core, such as Hex, C-box and as-1 motifs. Possesses high binding affinity to G-box, much lower affinity to Hex and C-box, and little affinity to as-1 element (PubMed:18315949). G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control (Probable). Binds to the G-box motif 5'-CACGTG-3' of LHCB2.4 (At3g27690) promoter. May act as transcriptional repressor in light-regulated expression of LHCB2.4. Binds DNA as monomer. DNA-binding activity is redox-dependent (PubMed:22718771). {ECO:0000269|PubMed:18315949, ECO:0000269|PubMed:22718771, ECO:0000305|PubMed:18315949}. |
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT2G35530.1 | 1e-173 | basic region/leucine zipper transcription factor 16 |
