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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009132542.1 |
Organism |
|
Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Family |
MYB |
Protein Properties |
Length: 267aa MW: 30998.8 Da PI: 9.0274 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009132542.1 | genome | NCBI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 37.3 | 6.3e-12 | 17 | 64 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g W++eEd++l+ + G +W+t++ g+ R +k+c++rw +yl
XP_009132542.1 17 KGLWSPEEDQKLKSFILSQGHACWTTVPILAGLQRNGKSCRLRWINYL 64
678*******************************************97 PP
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2 | Myb_DNA-binding | 54.7 | 2.3e-17 | 70 | 115 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg +++eE+e ++ ++ lG++ W++Ia++++ gRt++++k++w++yl
XP_009132542.1 70 RGTFSAEEEETILTLHSSLGNK-WSRIAKYLP-GRTDNEIKNYWHSYL 115
899*******************.*********.************997 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 267 aa
Download sequence Send
to blast |
MGKMTKSGER PKQRQRKGLW SPEEDQKLKS FILSQGHACW TTVPILAGLQ RNGKSCRLRW 60 INYLRPGLKR GTFSAEEEET ILTLHSSLGN KWSRIAKYLP GRTDNEIKNY WHSYLKKGCL 120 KSQPQLKTQR SNLTESSSSP VSCGKRNPET LDHVISFQTL PEKPYSPQSQ GSNKNMMKSN 180 NMPKLFFSEW ITSSDPHVNY SSEFTDSLHI NQTQNRSEDE ELVMIKNSYS SLEDDVMFRT 240 EFQQPHHEYA NYYTSEDFFI NSDVTYM
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed at very low level. Expressed in cauline leaves. {ECO:0000269|PubMed:11581165}. |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that promotes photomorphogenesis in the light by participating in the transmission of phytochrome A (phyA) signals to downstream responses (PubMed:11581165, PubMed:19482971). Probably acts by activating expression of light-induced genes. In darkness, its degradation prevents the activation of light-induced genes (PubMed:11581165). {ECO:0000269|PubMed:11581165, ECO:0000269|PubMed:19482971}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By hormones or elicitors treatment. By exposure to abiotic stress. {ECO:0000269|PubMed:9839469}. |