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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
XP_009131877.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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| Family |
NAC |
| Protein Properties |
Length: 235aa MW: 26373.5 Da PI: 5.1996 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_009131877.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 126.2 | 2.7e-39 | 6 | 136 | 2 | 127 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91
+ GfrF Pt++elv +yL++++eg++ ++++vi+ +d+++veP++Lp +++++ ++w+fF++r++++a+g ++r+t sg Wkatg+ +
XP_009131877.1 6 TTGFRFYPTEDELVEFYLRNQLEGRSgDSMHRVIPVLDVFEVEPSHLPDlageRCRGDAEQWFFFVPRQEREARGGGPSRTTGSGHWKATGSPGP 100
68***********************96667778**************9546666667888*********************************** PP
NAM 92 vlskkgelvglkktLvfykgrapkgektdWvmheyr 127
+sk+++ +g+kkt+vfy+grap+g kt+W m+ey+
XP_009131877.1 101 AFSKDNRMIGVKKTMVFYTGRAPTGGKTKWKMNEYK 136
***********************************8 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 235 aa
Download sequence Send
to blast |
MEEDLTTGFR FYPTEDELVE FYLRNQLEGR SGDSMHRVIP VLDVFEVEPS HLPDLAGERC 60
RGDAEQWFFF VPRQEREARG GGPSRTTGSG HWKATGSPGP AFSKDNRMIG VKKTMVFYTG 120
RAPTGGKTKW KMNEYKALDD RGNVSAIPKL RHEFSLCRVY VTSGSSRAFD RRPVGVRQTG 180
TMLTNDVAVA ETSFTVGTSP EISMSGGEHV DLSVDTEMVD GLTEPIWEWE QLNWP
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 3swm_A | 1e-28 | 5 | 167 | 20 | 173 | NAC domain-containing protein 19 |
| 3swm_B | 1e-28 | 5 | 167 | 20 | 173 | NAC domain-containing protein 19 |
| 3swm_C | 1e-28 | 5 | 167 | 20 | 173 | NAC domain-containing protein 19 |
| 3swm_D | 1e-28 | 5 | 167 | 20 | 173 | NAC domain-containing protein 19 |
| 3swp_A | 1e-28 | 5 | 167 | 20 | 173 | NAC domain-containing protein 19 |
| 3swp_B | 1e-28 | 5 | 167 | 20 | 173 | NAC domain-containing protein 19 |
| 3swp_C | 1e-28 | 5 | 167 | 20 | 173 | NAC domain-containing protein 19 |
| 3swp_D | 1e-28 | 5 | 167 | 20 | 173 | NAC domain-containing protein 19 |
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