PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009130529.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Family | bZIP | ||||||||
Protein Properties | Length: 136aa MW: 16115.4 Da PI: 10.5207 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 34.4 | 4.7e-11 | 18 | 78 | 2 | 62 |
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 k+ + +rk +N e+ArrsR +K+++++ L+ +L +eN++L ++l +++ +e XP_009130529.1 18 KDERQKKRKKSNPESARRSRMKKQKYLDDLRSQLNQLNTENRELENQLRYVMHHCQGANME 78 4556678999***********************************9999999999866655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.1E-9 | 16 | 71 | No hit | No description |
SMART | SM00338 | 1.7E-11 | 17 | 81 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.162 | 19 | 65 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 4.1E-8 | 19 | 74 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 4.94E-10 | 21 | 72 | No hit | No description |
CDD | cd14702 | 1.74E-12 | 22 | 73 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 24 | 39 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 136 aa Download sequence Send to blast |
MEDRPSNLTG LNVFFPKKDE RQKKRKKSNP ESARRSRMKK QKYLDDLRSQ LNQLNTENRE 60 LENQLRYVMH HCQGANMEND RLRVENQILH EKLMSLRQAL VLRQIQQSST CATWSCVNST 120 VVTVHQNPSM LRDHVI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 21 | 39 | QKKRKKSNPESARRSRMKK |
2 | 22 | 26 | KKRKK |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_009130529.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_013712028.1 | 3e-97 | basic leucine zipper 4-like | ||||
TrEMBL | M4ESR5 | 7e-96 | M4ESR5_BRARP; Uncharacterized protein | ||||
STRING | Bra031845.1-P | 1e-96 | (Brassica rapa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM3338 | 26 | 65 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G49760.1 | 2e-28 | basic leucine-zipper 5 |