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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009130508.1 |
Organism |
|
Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Family |
M-type_MADS |
Protein Properties |
Length: 331aa MW: 37756 Da PI: 9.8261 |
Description |
M-type_MADS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009130508.1 | genome | NCBI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SRF-TF | 74.1 | 1.1e-23 | 6 | 55 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
+++++s + +++s+R+++i+KKA+ELS+LC++ v+vi+++++g l+++++
XP_009130508.1 6 SSSSNSLAATSLSNRLKTIFKKASELSILCQVAVSVIYYGPNGDLKTWPK 55
78999*******************************************96 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 331 aa
Download sequence Send
to blast |
MRASSSSSSN SLAATSLSNR LKTIFKKASE LSILCQVAVS VIYYGPNGDL KTWPKEKEVV 60 KDMALRYKVA TKRKKSSNLR DFLEGKLEND KNLKKNKKKT KREFENVKYP DCYPVLDHYS 120 PDQLHELVLS LQGTLSTMEE RIRVLEAKKQ RNTNLVHQTV QPSNPSKCSL YLYNHDDATL 180 SQLPLSASHS NQLINYQNHL RMQQQRLYDP CVSTTQGHPA LLSVQESRLK NQLMQQQEAY 240 GSHHNVRMMN NTTNSKVLGH PCPLKTIPKE FSFDLQKNPN DDMVGRPKYS QDFPNLFLAY 300 ADIPQLQTSS LPSIHQTIPN INLIPDNSRC P
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 93 | 101 | KKNKKKTKR |