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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009127638.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Family |
CO-like |
Protein Properties |
Length: 401aa MW: 45585.3 Da PI: 5.2932 |
Description |
CO-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009127638.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-B_box | 27.6 | 6.1e-09 | 14 | 58 | 3 | 41 |
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41
+r C+ + + +++++C ++ +lC++C ++H+ H++v
XP_009127638.1 14 ARACDSCLKRRARWYCAADDAFLCHSCDGSIHSAnplarrHERVL 58
578*****************************6688888898875 PP
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2 | CCT | 68.5 | 1.8e-23 | 352 | 395 | 1 | 44 |
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44
Rea+++RY+eKr+tR+F+KkirYe+RK +Ae+RpR+KGrFvk++
XP_009127638.1 352 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRS 395
9*****************************************97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 401 aa
Download sequence Send
to blast |
MMKNSANVVG GKTARACDSC LKRRARWYCA ADDAFLCHSC DGSIHSANPL ARRHERVLLK 60 SASPGKQRHD SSSPPHPPTW HQGFTRKART RRGGKKSHTM IFHDLVPEMS SEDQSFEVEE 120 QLIFEVPVLN PMCHEKCLNE SMETKIELPL MSMCFKGSDE EDDNAESCLN GLFPTDTELA 180 QFSADVEILL GGGTDREYNM EELGLGEMLK VEKEEVEEEE EVATIEVCDL DAADEITPFV 240 ISFEYEYSQK TNLEEEDEKQ DVENNMIDVG VNEMSCSIKE EKNEKVHMLR LDYESVISTW 300 GGQGTPWTAR ETPQIDLNML CCPTDSMVES GGEAHHHNYV RGLGLHMGEA GREARVSRYR 360 EKRRTRLFSK KIRYEVRKLN AEKRPRMKGR FVKRSSIAAA H
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 362 | 378 | RRTRLFSKKIRYEVRKL |