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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
XP_009127148.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
|
| Family |
GRF |
| Protein Properties |
Length: 299aa MW: 32577.5 Da PI: 8.6482 |
| Description |
GRF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_009127148.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRC | 76.2 | 3.4e-24 | 57 | 99 | 2 | 44 |
WRC 2 aepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44
epgrCrRtDGKkWRCs++v++++k+CErHlhrgr rsrk++e
XP_009127148.1 57 LEPGRCRRTDGKKWRCSKEVVSNHKYCERHLHRGRPRSRKHVE 99
69***************************************97 PP
|
| 2 | QLQ | 51.4 | 3.2e-18 | 8 | 39 | 2 | 33 |
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlq 33
+FT+aQl +L++Q+++yKy++a+ PvP +Ll+
XP_009127148.1 8 PFTNAQLKELERQAMIYKYMIASIPVPFDLLV 39
9*****************************97 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 299 aa
Download sequence Send
to blast |
MGCYYYYPFT NAQLKELERQ AMIYKYMIAS IPVPFDLLVS SSSYAPPCNN KNAVGDLEPG 60
RCRRTDGKKW RCSKEVVSNH KYCERHLHRG RPRSRKHVEL PYSRPINIGG GSEKNRVLSS 120
IKDTTVVEPK EVSSALANYR GLEIFPASAS NEQENKYLNF IDVWSDGVRS SEKQSTPASS 180
SPNGNPSLYS LDLSMGGNSL MGHDEMGLRV IGPGRDDPHG YGPYGGVVSS SLDEMSRWLA 240
STSATPGGPL AEILRPNPSS AFSGEMEGNS LTATPTPSSS PSRVVKKVTG SVSDDSSKI
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | DEVELOPMENTAL STAGE: Expressed during the early stages of leaf development and expression decreases with the maturation of the leaf. {ECO:0000269|PubMed:20023165}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription activator that plays a role in the regulation of cell expansion in leaf and cotyledons tissues. Component of a network formed by miR396, the GRFs and their interacting factors (GIFs) acting in the regulation of meristem function, at least partially through the control of cell proliferation. {ECO:0000250}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: microRNA 396 (miR396a or miR396b) negatively regulates growth-regulating factors (GRF1-4 and GRF7-9). {ECO:0000269|PubMed:15200956, ECO:0000269|PubMed:19453503, ECO:0000269|PubMed:20023165}. |
