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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009126534.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Family |
NAC |
Protein Properties |
Length: 343aa MW: 38501.9 Da PI: 4.9867 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009126534.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 157.8 | 4.4e-49 | 22 | 147 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95
pGf+F+Ptd el+++yLk+k++g + ++ evi+e+diy++ePwdLp k++ ++++ew+fF+ r kky++g++++ratk gyWkatgk+++v+s
XP_009126534.1 22 FPGFKFSPTDVELISYYLKRKMDGLERSV-EVIPETDIYNFEPWDLPdKSIVKSDTEWFFFCARGKKYPHGSQNRRATKMGYWKATGKERDVKS- 114
69************************999.99***************778888999**************************************. PP
NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
+++++g+k+tLvf+ grapkge+t+W+mhey +
XP_009126534.1 115 SSQVIGTKRTLVFHIGRAPKGERTEWLMHEYCM 147
999****************************86 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009626 | Biological Process | plant-type hypersensitive response |
GO:0009910 | Biological Process | negative regulation of flower development |
GO:0034976 | Biological Process | response to endoplasmic reticulum stress |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0005783 | Cellular Component | endoplasmic reticulum |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 343 aa
Download sequence Send
to blast |
MEAEAMGGFK DTAASVEAAT VFPGFKFSPT DVELISYYLK RKMDGLERSV EVIPETDIYN 60 FEPWDLPDKS IVKSDTEWFF FCARGKKYPH GSQNRRATKM GYWKATGKER DVKSSSQVIG 120 TKRTLVFHIG RAPKGERTEW LMHEYCMKGV SMDDALVVCR LRRNKEFHTS TSQKAPEPDL 180 PTEKHMVMQN GGAASSGSLT DWDSMVDFYL AGESGEELLN EMAETSKNLQ VQTEDDFFAD 240 ILKDEIINVD EAVTTGNIAN EVPTLESASK AIRVLPLPSM IDKQMASLLE ERPSEQKKCK 300 GSSGTDQLSS CFVGIYSIKT VNRARWDVII CLVALIVMFF CLE
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 1e-41 | 23 | 174 | 19 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 1e-41 | 23 | 174 | 19 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 1e-41 | 23 | 174 | 19 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 1e-41 | 23 | 174 | 19 | 171 | NO APICAL MERISTEM PROTEIN |
3swm_A | 2e-41 | 23 | 174 | 22 | 174 | NAC domain-containing protein 19 |
3swm_B | 2e-41 | 23 | 174 | 22 | 174 | NAC domain-containing protein 19 |
3swm_C | 2e-41 | 23 | 174 | 22 | 174 | NAC domain-containing protein 19 |
3swm_D | 2e-41 | 23 | 174 | 22 | 174 | NAC domain-containing protein 19 |
3swp_A | 2e-41 | 23 | 174 | 22 | 174 | NAC domain-containing protein 19 |
3swp_B | 2e-41 | 23 | 174 | 22 | 174 | NAC domain-containing protein 19 |
3swp_C | 2e-41 | 23 | 174 | 22 | 174 | NAC domain-containing protein 19 |
3swp_D | 2e-41 | 23 | 174 | 22 | 174 | NAC domain-containing protein 19 |
4dul_A | 1e-41 | 23 | 174 | 19 | 171 | NAC domain-containing protein 19 |
4dul_B | 1e-41 | 23 | 174 | 19 | 171 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor involved in plant cell division. {ECO:0000269|PubMed:16803883}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KF974764 | 0.0 | KF974764.1 Brassica napus NAC transcription factor 89-1 (NAC89-1.1) mRNA, complete cds. |