PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009126501.1
Organism
Brassica rapa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
Family EIL
Protein Properties Length: 527aa    MW: 59869.4 Da    PI: 6.7897
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009126501.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3366.35.3e-112554111354
                     XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
            EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWW 95 
                     eel+++ wkd+++lk+lke++k+  +++          k  e + ++ m +aQDgiLkYM k me c+aqGfvYgi+ e+gk+v+g+sd+Lr+WW
  XP_009126501.1  55 EELERKIWKDKQRLKQLKEMSKNGSGKRLL--------KHPEDSTKRMMYQAQDGILKYMSKAMERCKAQGFVYGIVFENGKTVTGSSDNLREWW 141
                     8**************999999986544433........6789999************************************************** PP

                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX......XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--T CS
            EIN3  96 kekvefdrngpaaiskyqaknlilsgessl..qtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglsk 188
                     k+ v+fdrngp ai  +q + ++++++s+l  +  ++ + h+l elqDTtlg+LLsalm  c+ppqrr+ple+g++pPWWPtGke+ww+ l+l++
  XP_009126501.1 142 KDRVRFDRNGPGAILRHQRQINLSADGSELggSEGGECTAHKLLELQDTTLGALLSALMPNCTPPQRRYPLERGLSPPWWPTGKEDWWNDLSLPE 236
                     *****************99999999999986444466789******************************************************* PP

                     T--...-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX..........XXXXXX CS
            EIN3 189 dqg..tppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss..........slrkqs 271
                     d +  +ppykkphdlkk+wkv+vL + i+hm+ +i++i +l+r+s++lq+km+++e   +l+ lnqe++ +++ + ++              +++
  XP_009126501.1 237 DCRglPPPYKKPHDLKKVWKVGVLISIIRHMASEIDNIPKLVRRSRSLQEKMTSREGSLWLAALNQEKSNVDQTQYNPLafsgesnanaLGASGE 331
                     ***********************************************************************999888333445655554333489 PP

                     XXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXXXXX CS
            EIN3 272 pkvtlsceqkedvegkkeskikhvqavkttagfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsisqney 354
                     ++v ++++ +++ve    s  +hv +v +  +f+ v+ ++k ++e      +    tc++s +++s+++++f+d+  ++++++
  XP_009126501.1 332 TDVLFQESGDYNVEAAYGSP-QHVPEVAN--NFNYVNNKRKFEGELGLSFHQTRNLTCENSYCPYSQPHMGFNDRVLRDSHQM 411
                     99999999999999888888.88888776..888887777778888877778889*************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048739.0E-10755304No hitNo description
Gene3DG3DSA:1.10.3180.101.6E-59177310IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167683.01E-52181306IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 527 aa     Download sequence    Send to blast
MTFFYRVISL SLLLKMFNNN TEMFSGLVSN PERDVGPASL TAVCDDLTNQ DIEIEELERK  60
IWKDKQRLKQ LKEMSKNGSG KRLLKHPEDS TKRMMYQAQD GILKYMSKAM ERCKAQGFVY  120
GIVFENGKTV TGSSDNLREW WKDRVRFDRN GPGAILRHQR QINLSADGSE LGGSEGGECT  180
AHKLLELQDT TLGALLSALM PNCTPPQRRY PLERGLSPPW WPTGKEDWWN DLSLPEDCRG  240
LPPPYKKPHD LKKVWKVGVL ISIIRHMASE IDNIPKLVRR SRSLQEKMTS REGSLWLAAL  300
NQEKSNVDQT QYNPLAFSGE SNANALGASG ETDVLFQESG DYNVEAAYGS PQHVPEVANN  360
FNYVNNKRKF EGELGLSFHQ TRNLTCENSY CPYSQPHMGF NDRVLRDSHQ MTCPYKTLSY  420
YQPAKPLGMP LSFMTPYQVE MQQQQQQEQF NLSNTLYRPK AVERGGNNDY LSDHRFGLVD  480
NSSPSTSAMN HNPGLVLPVN FNGNEETVGM ENNQHNQEGG LPMPWIE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A1e-511803052125Protein ETHYLENE INSENSITIVE 3
4zds_B1e-511803052125Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor acting as a positive regulator in the ethylene response pathway. Could bind the primary ethylene response element present in the ETHYLENE-RESPONSE-FACTOR1 promoter. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_009126501.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009126501.10.0PREDICTED: ETHYLENE INSENSITIVE 3-like 2 protein
SwissprotO231150.0EIL2_ARATH; ETHYLENE INSENSITIVE 3-like 2 protein
TrEMBLA0A398A7L80.0A0A398A7L8_BRACM; Uncharacterized protein
STRINGBo2g023430.10.0(Brassica oleracea)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM147191621
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G21120.10.0ETHYLENE-INSENSITIVE3-like 2