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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009126247.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Family |
NAC |
Protein Properties |
Length: 336aa MW: 38312.4 Da PI: 6.9444 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009126247.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 178.6 | 1.7e-55 | 21 | 147 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95
lppGfrFhPtdee++++yLk+kv ++++++ ++ e+d++k+ePwdLpk++k +eke yfF++rd+ky+tg r+nrat+sgyWkatgkdke+++
XP_009126247.1 21 LPPGFRFHPTDEEIITFYLKEKVLDSRFTA-VAMGEADLNKCEPWDLPKRAKMGEKEFYFFCQRDRKYPTGMRTNRATESGYWKATGKDKEIFKG 114
79*************************999.67***************99999*****************************************9 PP
NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
kg lvg+kktLvfy+grap+gekt+Wvmheyrl
XP_009126247.1 115 KGCLVGMKKTLVFYRGRAPRGEKTNWVMHEYRL 147
*******************************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 336 aa
Download sequence Send
to blast |
MAVVVEEGVV LNHGGEELVD LPPGFRFHPT DEEIITFYLK EKVLDSRFTA VAMGEADLNK 60 CEPWDLPKRA KMGEKEFYFF CQRDRKYPTG MRTNRATESG YWKATGKDKE IFKGKGCLVG 120 MKKTLVFYRG RAPRGEKTNW VMHEYRLDGK YSHHNLPKSA RDEWVVCRVF HKNNPSTTTP 180 QMTRMPIENL TRMDSLENID HLLDFSSLPS LMDPSFMGQH DQHNFKPINP PTYNISSPIQ 240 PHHFNCNYQS IFNHQGYGSA SGSGSTYNNN KEMIKMEPSL VSVSQETCLS SDVNATTTIE 300 VSSGPVMKQE MSMTGMVNGS KSYEDLCDLR GVLWDY
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Functional Description ? help
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Source |
Description |
UniProt | Binds to the promoter regions of genes involved in chlorophyll catabolic processes, such as NYC1, SGR1, SGR2 and PAO. {ECO:0000269|PubMed:27021284}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KP641357 | 0.0 | KP641357.1 Brassica napus NAC transcription factor 87.1 (NAC87.1) mRNA, complete cds. |