 |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
XP_009126127.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
|
Family |
MYB |
Protein Properties |
Length: 319aa MW: 36094.1 Da PI: 5.4176 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009126127.1 | genome | NCBI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 44.3 | 4e-14 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT eEd++l++ + G +W++ ++ g+ R++k+c++rw +yl
XP_009126127.1 14 KGPWTVEEDKKLINFILTNGQCCWRALPKLSGLLRCGKSCRLRWINYL 61
79******************************99************97 PP
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2 | Myb_DNA-binding | 51.2 | 2.9e-16 | 71 | 112 | 5 | 48 |
-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
++ E++ +d+++qlG++ W++Ia+ ++ gRt++++k++w++++
XP_009126127.1 71 SENEEQMVIDLHAQLGNR-WSKIASNLP-GRTDNEIKNHWNTHR 112
789***************.*********.************996 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 319 aa
Download sequence Send
to blast |
MGRQPCCDKV GLKKGPWTVE EDKKLINFIL TNGQCCWRAL PKLSGLLRCG KSCRLRWINY 60 LRPDLKRGLL SENEEQMVID LHAQLGNRWS KIASNLPGRT DNEIKNHWNT HRKKKLRKMG 120 IGPMAHKPLS EQDGAQQQAQ GRKKSLVSRD EKNTNQGQED QQQTRKEEDQ QHQLGKDLEK 180 NNTPISTDDG FCIDDIPLLS PHEIFVDIPS AHHHTSDDNA NINISNSTSP SSSSSSTSSC 240 ISSLPGDEFS KFLDEMEIVD LKWLSSDDSS GGNINYNDGK FNNNVDTMSL WDINDLSSLE 300 LFMNDHDDSV VEADVQEWF
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KF974751 | 0.0 | KF974751.1 Brassica napus MYB transcription factor 43-1 (MYB43-1.1) mRNA, complete cds. |