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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
XP_009125576.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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| Family |
MYB_related |
| Protein Properties |
Length: 213aa MW: 24103.5 Da PI: 5.8082 |
| Description |
MYB_related family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_009125576.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 36.2 | 1.4e-11 | 99 | 142 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
+W++ E++l++ + ++G+g+W++I+r + +Rt+ q+ s+ qk
XP_009125576.1 99 PWSENEHKLFLIGLDRYGKGDWRSISRNVVVTRTPTQVASHAQK 142
8****************************************998 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 213 aa
Download sequence Send
to blast |
MASSQWTRSE DKRFEEALVF FPEGSPNRWE RIADQLHKPV GEVREHYEAL VHDVFQIDSG 60
QVDVPDYIDD SAAAAGWDSA GQISFGTKHS EGERKRGTPW SENEHKLFLI GLDRYGKGDW 120
RSISRNVVVT RTPTQVASHA QKSFLRQNSV KKERKRSSIH DINTVDTSLA MPGSNMEWTG 180
QHESPVQTQQ QLVSEFGQEL TPGGHFEDFG FGM
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | DEVELOPMENTAL STAGE: Detected in the apical inflorescence meristem, in bract primordia arising in its periphery and in floral meristems produced in the axils of bracts (stages 0-3). From stage 3 to stage 8, detected in all floral organs irrespective of their dorsoventral positions. From stage 9, barely detectable in bracts, sepals, and stamens. In the corolla, however, expression was maintained and enhanced in some regions. Within ventral and lateral petals at stage 9, asymmetric pattern of expression with high levels of transcripts in the inner epidermis of the furrow and very reduced levels in the remaining cell layers. In the dorsal petals, from stage 9 onward, detected but with a more even distribution across cell layers than in the ventral petal. {ECO:0000269|PubMed:11937495}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Involved in the dorsovental asymmetry of flowers. Promotes ventral identity. {ECO:0000269|PubMed:11937495, ECO:0000269|PubMed:9118809}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC189388 | 1e-177 | AC189388.2 Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB053D06, complete sequence. |
