 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
XP_009124751.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
|
Family |
MYB |
Protein Properties |
Length: 251aa MW: 28195.8 Da PI: 7.5045 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009124751.1 | genome | NCBI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 54.2 | 3.3e-17 | 25 | 72 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg+WT+eEde+lv +k+ G g+W++ +++ g+ R++k+c++rw +yl
XP_009124751.1 25 RGPWTAEEDEILVSFIKKEGEGRWRSLPKRAGLLRCGKSCRLRWMNYL 72
89******************************99************97 PP
|
2 | Myb_DNA-binding | 51.6 | 2.2e-16 | 79 | 123 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
g T++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++l
XP_009124751.1 79 GGITPDEEDLIIRLHRLLGNR-WSLIAGRIP-GRTDNEIKNYWNTHL 123
667******************.*********.************996 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 251 aa
Download sequence Send
to blast |
MTSSGGKKQV VKKMIPCCMK MGMKRGPWTA EEDEILVSFI KKEGEGRWRS LPKRAGLLRC 60 GKSCRLRWMN YLRSSVKRGG ITPDEEDLII RLHRLLGNRW SLIAGRIPGR TDNEIKNYWN 120 THLRKKLLSE GIDPQTHKPL DANNAHHKPG EEVSGGQNLL EPNSSSHTDD TTVNSGNEAT 180 KITFSVFGGE DNEDFGFCYD DKFSSFLNAL INDDPFDSNI PLSQPFRTQD CTGEIVGTSS 240 SLEHGQRIED I
|
Expression --
Description ? help
Back to Top |
Source |
Description |
Uniprot | TISSUE SPECIFICITY: Siliques. {ECO:0000269|PubMed:9839469}. |
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Transcription activator, when associated with BHLH002/EGL3/MYC146, BHLH012/MYC1 or BHLH042/TT8. {ECO:0000269|PubMed:15361138}. |