 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
XP_009124451.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
|
| Family |
GeBP |
| Protein Properties |
Length: 204aa MW: 23460.9 Da PI: 4.7577 |
| Description |
GeBP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_009124451.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF573 | 94.9 | 8.1e-30 | 56 | 150 | 3 | 97 |
DUF573 3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97
++ w+++De+++L ++d++++t+ s +d+dafy +vk+ i++++sk+ql++Kir+L k+f +++++ ++++ psf+ ++d+ if+ls +iW+
XP_009124451.1 56 NKMNWTKDDELIILGSIVDYEKETKLSHRSDWDAFYGYVKDFIEADFSKKQLTDKIRNLNKRFLGNKARCSDEEGPSFTDTEDDIIFKLSVIIWD 150
5799******************************************************************************************8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 204 aa
Download sequence Send
to blast |
MVLGKRTREH STDSNDKPIS SSPLRRMQLD DVSGVESMLR RRKQPKTTPV SSSSNNKMNW 60
TKDDELIILG SIVDYEKETK LSHRSDWDAF YGYVKDFIEA DFSKKQLTDK IRNLNKRFLG 120
NKARCSDEEG PSFTDTEDDI IFKLSVIIWD STNETECASD ENVDQQAKDV RCVENERVDE 180
NMDQAKDAPS VEHEQVSKNM DQAK
|
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in the apical meristem and young leaf primordia. Detected in the vascular tissues of rosette leaves, in primary and secondary roots and at the base of flowers and siliques. {ECO:0000269|PubMed:18162594}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor. Involved in stress responses (PubMed:21875893). Plays a repressive role in cell expansion by counteracting the positive role of CPR5 in this process, but does not regulate cell proliferation or endoreduplication (PubMed:21875893). {ECO:0000269|PubMed:21875893}. |
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT2G36340.1 | 2e-50 | DNA-binding storekeeper protein-related transcriptional regulator |
