 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
XP_009123251.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
|
| Family |
ERF |
| Protein Properties |
Length: 174aa MW: 19206.6 Da PI: 8.0569 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_009123251.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 47.5 | 4.4e-15 | 1 | 46 | 6 | 55 |
AP2 6 VrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
Vr++ +g+Wv+eIr+p +r++lg+f taeeAa+ +++a+ ++g
XP_009123251.1 1 VRQRQ-WGSWVSEIRHP-----LlkRRVWLGTFNTAEEAARVYDQAAVLMNG 46
88888.**********8.....334*********************977765 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 174 aa
Download sequence Send
to blast |
VRQRQWGSWV SEIRHPLLKR RVWLGTFNTA EEAARVYDQA AVLMNGQNAK TNFPVIKSNG 60
SVSPDVNTPL SELLNAKLRK NCKDQTPYLT CLRLDNNSSH IGVWQKRAGS SSSQNWVKLV 120
ELGDGVSASA GDTGTNKLKK GNDDVEEEDQ MSMQMIEELL NWTCPASASV SGLS
|
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Found in all organs, mostly in veins, epidermis and trichome bases. Specific expression in lateral root tips. {ECO:0000269|PubMed:15319479}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Promotes cuticle formation by inducing the expression of enzymes involved in wax biosynthesis. Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:15319479}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By wounding in cauline leaves, stems, and siliques, but not in rosette leaves. {ECO:0000269|PubMed:15319479}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC189321 | 0.0 | AC189321.2 Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB036J07, complete sequence. |
