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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009122368.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Family | bZIP | ||||||||
Protein Properties | Length: 147aa MW: 17096.7 Da PI: 9.4759 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 29.8 | 1.3e-09 | 52 | 108 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 k+ +r +NR+AA++sR +K+++i+ L +k+ L + L++++e+ +++ + l+ e+ XP_009122368.1 52 KKLKRIVSNRVAAQKSRWKKLQYIDDLVKKSRDLNVSM--LRSQVEMASEQKQCLEREK 108 8999********************************99..9****99999988777665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 8.4E-8 | 44 | 112 | No hit | No description |
SMART | SM00338 | 1.6E-5 | 48 | 110 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 4.1E-7 | 52 | 108 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.62E-8 | 52 | 111 | No hit | No description |
CDD | cd14703 | 1.18E-9 | 53 | 102 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 55 | 70 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 147 aa Download sequence Send to blast |
MSDPSFPVPT SFQVSNDGSQ VEEKKTGYLN YEVEPGFTIR LRQNIDPAMD PKKLKRIVSN 60 RVAAQKSRWK KLQYIDDLVK KSRDLNVSML RSQVEMASEQ KQCLEREKME LKECMAGWIQ 120 RFISDQGEIE ANTAEIERLK KKMAHMI |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_009122368.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009122368.1 | 1e-106 | PREDICTED: basic leucine zipper 19 isoform X2 | ||||
TrEMBL | M4CYJ1 | 1e-105 | M4CYJ1_BRARP; Uncharacterized protein | ||||
STRING | Bra009288.1-P | 1e-106 | (Brassica rapa) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G07160.1 | 5e-58 | bZIP family protein |