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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
XP_009120398.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
|
| Family |
MYB_related |
| Protein Properties |
Length: 291aa MW: 31885.5 Da PI: 7.2732 |
| Description |
MYB_related family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_009120398.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 45.9 | 1.3e-14 | 144 | 188 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
+WT+eE++l++ + k++G+g+W+ I+r + +Rt+ q+ s+ qky
XP_009120398.1 144 PWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKY 188
8*****************************99************9 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 291 aa
Download sequence Send
to blast |
MEILRPTTSH VSGGSWLMEE TKSNVATARE SATWTAAENK AFENALAVYD DNTPDRWQKV 60
AAVIPGKTVS DVIRQYNELE ADVSNIEAGL IPVPGYITSP PFTLDWTAGG GGGGCNGFKP 120
GHPVGNKRSP AVRSPELERK KGVPWTEEEH KLFLMGLKKY GKGDWRNISR NFVITRTPTQ 180
VASHAQKYFI RQHSGGKDKR RASIHDITTV NLEDEASLET NKNSLVGREQ HSRLGGFPWS 240
QMDNTGNHAD AFNITIGNAL SGVNSYGQAM LGPFNTTADS CYDAQSTMFQ L
|
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | DEVELOPMENTAL STAGE: Detected in the apical inflorescence meristem, in bract primordia arising in its periphery and in floral meristems produced in the axils of bracts (stages 0-3). From stage 3 to stage 8, detected in all floral organs irrespective of their dorsoventral positions. From stage 9, barely detectable in bracts, sepals, and stamens. In the corolla, however, expression was maintained and enhanced in some regions. Within ventral and lateral petals at stage 9, asymmetric pattern of expression with high levels of transcripts in the inner epidermis of the furrow and very reduced levels in the remaining cell layers. In the dorsal petals, from stage 9 onward, detected but with a more even distribution across cell layers than in the ventral petal. {ECO:0000269|PubMed:11937495}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Involved in the dorsovental asymmetry of flowers. Promotes ventral identity. {ECO:0000269|PubMed:11937495, ECO:0000269|PubMed:9118809}. |
