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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009119787.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Family |
NAC |
Protein Properties |
Length: 219aa MW: 23374.1 Da PI: 8.7792 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009119787.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 118.1 | 8.6e-37 | 6 | 140 | 2 | 127 |
NAM 2 ppGfrFhPtdeelvveyLkkk.vegkkleleevikevdiykvePwdLp.k...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91
p+GfrF+Ptdee+ + yLk k ++g++ +++evi++vdiy+++P +L + + k++++ +yfF+++d++y++g+r++r+tksg Wk+tg +++
XP_009119787.1 6 PVGFRFRPTDEEIFNPYLKSKnMDGNTSHVDEVISTVDIYSFDPLELAsQstsTRKETDNVLYFFCPKDNRYNRGERQSRKTKSGSWKKTGVTTN 100
89*****************99355556888889**************843332222234466********************************* PP
NAM 92 vlsk..kgelvglkktLvfy..kgrapkgektdWvmheyr 127
+++k + e++g k+++vf k + k+dWvmhey
XP_009119787.1 101 IMRKrgDCEKIGEKRVFVFQysKILGGSKPKSDWVMHEYV 140
***9666678*********844223344458********7 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 219 aa
Download sequence Send
to blast |
MVDPHPVGFR FRPTDEEIFN PYLKSKNMDG NTSHVDEVIS TVDIYSFDPL ELASQSTSTR 60 KETDNVLYFF CPKDNRYNRG ERQSRKTKSG SWKKTGVTTN IMRKRGDCEK IGEKRVFVFQ 120 YSKILGGSKP KSDWVMHEYV ATFVFPAQTP MVTYALCKVM FKGDASDLPS SSAAAPAGGG 180 GSGGSGGGGC KGGGGSGGGG GGCDGSSGSG GGGCDWRWL
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 1e-20 | 6 | 167 | 18 | 170 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 1e-20 | 6 | 167 | 18 | 170 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 1e-20 | 6 | 167 | 18 | 170 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 1e-20 | 6 | 167 | 18 | 170 | NO APICAL MERISTEM PROTEIN |
3swm_A | 2e-20 | 6 | 167 | 21 | 173 | NAC domain-containing protein 19 |
3swm_B | 2e-20 | 6 | 167 | 21 | 173 | NAC domain-containing protein 19 |
3swm_C | 2e-20 | 6 | 167 | 21 | 173 | NAC domain-containing protein 19 |
3swm_D | 2e-20 | 6 | 167 | 21 | 173 | NAC domain-containing protein 19 |
3swp_A | 2e-20 | 6 | 167 | 21 | 173 | NAC domain-containing protein 19 |
3swp_B | 2e-20 | 6 | 167 | 21 | 173 | NAC domain-containing protein 19 |
3swp_C | 2e-20 | 6 | 167 | 21 | 173 | NAC domain-containing protein 19 |
3swp_D | 2e-20 | 6 | 167 | 21 | 173 | NAC domain-containing protein 19 |
4dul_A | 1e-20 | 6 | 167 | 18 | 170 | NAC domain-containing protein 19 |
4dul_B | 1e-20 | 6 | 167 | 18 | 170 | NAC domain-containing protein 19 |
Search in ModeBase |
Nucleic Localization
Signal ? help
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|
No. |
Start |
End |
Sequence |
1 | 181 | 195 | SGGSGGGGCKGGGGS |