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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
XP_009117546.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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| Family |
BES1 |
| Protein Properties |
Length: 319aa MW: 34918.8 Da PI: 9.9081 |
| Description |
BES1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_009117546.1 | genome | NCBI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF822 | 193.6 | 7.1e-60 | 15 | 154 | 2 | 149 |
DUF822 2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqs 96
+++rkp+w+ErEnn+rRER+RRa+aakiy GLRaqGn++lp ++DnneVlkALc eAGwvve+DGttyrkg kpl ++agss++a+ ss++
XP_009117546.1 15 ATRRKPSWRERENNRRRERKRRAVAAKIYNGLRAQGNFNLPRHCDNNEVLKALCSEAGWVVEEDGTTYRKGHKPL-PDDMAGSSSRATAYSSYN- 107
689************************************************************************.999*************99. PP
DUF822 97 slkssalaspvesysaspksssfpspssldsislasaasllpvlsvlslvsss 149
s ++sp+ sy+asp+sssfpsp d+ +++ +++p+l++ + +ss
XP_009117546.1 108 ---QSPFESPILSYQASPSSSSFPSPRGGDTHNIS---TIFPFLRNGGINPSS 154
...889*************************9995...899999988876665 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 319 aa
Download sequence Send
to blast |
MTSEGAMLTS AAAMATRRKP SWRERENNRR RERKRRAVAA KIYNGLRAQG NFNLPRHCDN 60
NEVLKALCSE AGWVVEEDGT TYRKGHKPLP DDMAGSSSRA TAYSSYNQSP FESPILSYQA 120
SPSSSSFPSP RGGDTHNIST IFPFLRNGGI NPSSLPPLRI SNSAPVTPPV SSPTSRNPKP 180
LPTWESLTKQ AMANAARQSV SSFNYPFYAV SAPTSPTHHR QFNAPATIPE CDESDSSTTD 240
SGHWISFQKF SQQQFRGGFA VPPSPTFNLV KPPLPQQLSS NIAAAQEIGS QVKPWEGERI 300
HDVAMEDLEL TLGNSKGRS
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 5zd4_A | 2e-33 | 17 | 99 | 371 | 453 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_B | 2e-33 | 17 | 99 | 371 | 453 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_C | 2e-33 | 17 | 99 | 371 | 453 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_D | 2e-33 | 17 | 99 | 371 | 453 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| Search in ModeBase |
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 16 | 35 | RRKPSWRERENNRRRERKRR |
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Ubiquitously expressed in cotyledons, leaves, hypocotyls and roots. {ECO:0000269|PubMed:12007405}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Positive regulator of brassinosteroid (BR) signaling. Transcription factor that activates target gene expression by binding specifically to the DNA sequence 5'-CANNTG-3'(E box) through its N-terminal domain. Can bind individually to the promoter as a homodimer or synergistically as a heterodimer with BIM1, BIM2 or BIM3. The C-terminal domain is probably involved in transcriptional activation (PubMed:12007405, PubMed:15680330, PubMed:18467490, PubMed:19170933). Recruits the transcription elongation factor IWS1 to control BR-regulated gene expression (PubMed:20139304). Forms a trimeric complex with IWS1 and ASHH2/SDG8 to regulate BR-regulated gene expression (PubMed:24838002). Promotes quiescent center (QC) self-renewal by cell divisions in the primary root. Binds to the E-boxes of the BRAVO promoter to repress its expression (PubMed:24981610). {ECO:0000269|PubMed:12007405, ECO:0000269|PubMed:15680330, ECO:0000269|PubMed:18467490, ECO:0000269|PubMed:19170933, ECO:0000269|PubMed:20139304, ECO:0000269|PubMed:24838002, ECO:0000269|PubMed:24981610}. |
| Publications
? help Back to Top |
- Salazar-Henao JE,Lehner R,Betegón-Putze I,Vilarrasa-Blasi J,Caño-Delgado AI
BES1 regulates the localization of the brassinosteroid receptor BRL3 within the provascular tissue of the Arabidopsis primary root.
J. Exp. Bot., 2016. 67(17): p. 4951-61
[PMID:27511026] - Nolan T, et al.
Identification of Brassinosteroid Target Genes by Chromatin Immunoprecipitation Followed by High-Throughput Sequencing (ChIP-seq) and RNA-Sequencing.
Methods Mol. Biol., 2017. 1564: p. 63-79
[PMID:28124247] - Ye H, et al.
RD26 mediates crosstalk between drought and brassinosteroid signalling pathways.
Nat Commun, 2017. 8: p. 14573
[PMID:28233777] - Nolan TM, et al.
Selective Autophagy of BES1 Mediated by DSK2 Balances Plant Growth and Survival.
Dev. Cell, 2017. 41(1): p. 33-46.e7
[PMID:28399398] - Yang M, et al.
SINAT E3 Ligases Control the Light-Mediated Stability of the Brassinosteroid-Activated Transcription Factor BES1 in Arabidopsis.
Dev. Cell, 2017. 41(1): p. 47-58.e4
[PMID:28399399] - Chen J, et al.
Arabidopsis WRKY46, WRKY54, and WRKY70 Transcription Factors Are Involved in Brassinosteroid-Regulated Plant Growth and Drought Responses.
Plant Cell, 2017. 29(6): p. 1425-1439
[PMID:28576847] - Yang M,Wang X
Multiple Ways of BES1/BZR1 Degradation to Decode Distinct Developmental and Environmental Cues in Plants.
Mol Plant, 2017. 10(7): p. 915-917
[PMID:28629641] - Saito M,Kondo Y,Fukuda H
BES1 and BZR1 Redundantly Promote Phloem and Xylem Differentiation.
Plant Cell Physiol., 2018. 59(3): p. 590-600
[PMID:29385529] - Liang T, et al.
UVR8 Interacts with BES1 and BIM1 to Regulate Transcription and Photomorphogenesis in Arabidopsis.
Dev. Cell, 2018. 44(4): p. 512-523.e5
[PMID:29398622]
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