PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009117143.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
Family bZIP
Protein Properties Length: 163aa    MW: 18712.7 Da    PI: 7.569
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009117143.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.22.6e-115699750
                    HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1  7 errkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50
                     +r   NReAAr++R++Kka+++ Le++vk L++ N+ L  +l+
  XP_009117143.1 56 XKRSCGNREAARKYREKKKARTAYLEDEVKRLQSLNEYLLRKLQ 99
                    578888*******************************9998876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.0E-1149117No hitNo description
SMARTSM003383.0E-650117IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.30152118IPR004827Basic-leucine zipper domain
PfamPF077161.8E-1352100IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.06E-854102No hitNo description
CDDcd146861.40E-1162103No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0042538Biological Processhyperosmotic salinity response
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    Send to blast
MSYVSFSKNH SQDGRDSHTH SCNPPGRDDA SHSHTCFHTH THLIIPDPQE NDNSDXKRSC  60
GNREAARKYR EKKKARTAYL EDEVKRLQSL NEYLLRKLQS QRMVETEIIK LRALLVEMQV  120
KIDDELGVFS FQKQCNGSGF VFKEGDVSLL SVCVGYIYDI GDK
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Expressed in young leaves and cauline leaves. {ECO:0000269|PubMed:19248824}.
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor involved in the regulation of salt stress response. Functions as a negative transcriptional regulator of salt stress acclimation response by regulating cation homeostasis (PubMed:18703123, PubMed:19248824). Regulates negatively the expression of genes contributing to ion and osmotic homeostasis during salt stress, such as the Na(+) transporter HKT1, the Na(+)/H(+) antiporter SOS1, the aquaporin PIP2-1 and the glutamine synthetase GLN1-3. In addition, targets genes with functions in plant growth and development, such as argonaute 4 (AGO4) and cyclophilin 19 (CYP19) (PubMed:19248824). {ECO:0000269|PubMed:18703123, ECO:0000269|PubMed:19248824}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_009117143.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by salt stress (PubMed:18703123, PubMed:19248824). Induced by osmotic stress (PubMed:19248824). {ECO:0000269|PubMed:18703123, ECO:0000269|PubMed:19248824}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022573728.15e-79basic leucine zipper 24 isoform X2
SwissprotQ8GTS13e-71BZP24_ARATH; Basic leucine zipper 24
TrEMBLA0A0D3BYL59e-77A0A0D3BYL5_BRAOL; Uncharacterized protein
STRINGBo4g125710.11e-77(Brassica oleracea)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM151721518
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G51960.17e-47basic leucine zipper 24