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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009115394.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Family |
B3 |
Protein Properties |
Length: 532aa MW: 59845.8 Da PI: 8.8683 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009115394.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 43 | 8.3e-14 | 25 | 101 | 15 | 97 |
-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
B3 15 rlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97
l +p f+++h g ++ kt +l++ s ++W v++ ++ + lt+GW++F+ a++L+ gD+++F+++g++ f +v++f
XP_009115394.1 25 YLNIPVAFFSKHveG-SNDHIKTAKLRTdASAKTWLVEM--DGLK----LTDGWEDFAVAHDLRIGDIIIFRHEGKMVF--HVTAF 101
589**********63.4444468888775888*******..6666....***********************9998888..87776 PP
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2 | B3 | 69 | 6.4e-22 | 163 | 256 | 5 | 99 |
-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
B3 5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
+++++l+ +rl++pk fa ++g+++ ++k+++l +e+g+sW+++++y+ ++ +++ + GW++F+ +ng+ +g ++F+l++ +++ +v+++ r+
XP_009115394.1 163 HVTPSSLSCDRLYVPKGFAMSNGLDNMSGKEIVLLNEEGKSWNLNITYNESGMHTFVRPGWRRFCAENGISQGHHCTFELVR-KSAPPVLRLSRA 256
5788999999*********************************************************************998.888888888775 PP
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3 | B3 | 63.3 | 3.7e-20 | 279 | 368 | 8 | 99 |
-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
B3 8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
s++l+ + l+l kf++++g+kk s +++l++e+g +W+v+l+ +s+r++l+ GWk F++ ng+k+gD ++Fkl++ ++ ++v+ ++++
XP_009115394.1 279 SNSLRIDKLYLQMKFVTANGMKKGFS-EIILKNEWGGRWSVRLRQYASSNRTYLGPGWKTFCQVNGIKAGDPFMFKLVE-TGDKPVLLLCSS 368
67788899************999887.****************99********************************98.666689888875 PP
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4 | B3 | 48.7 | 1.3e-15 | 437 | 530 | 4 | 98 |
E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS.-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
B3 4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesg.rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97
+++ ++lk++ lp f++ +g++ +s++++l ++g ++W v l +k+ g++ ++kGW+e ++a+g+k+g++++++l++++e+ +v+k++
XP_009115394.1 437 LTLTQNALKTSVQHLPLGFTRVNGIN--RSRKIMLLGKDGvKKWVVDLLKNKSTGAMRIRKGWRELCDAHGVKVGESFLLELIRDEEAIPVLKFC 529
56677888888889******999988..7889****************99999999*****************************9999999998 PP
- CS
B3 98 r 98
XP_009115394.1 530 T 530
5 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 532 aa
Download sequence Send
to blast |
MAHQSLHSPT NPHFFQPLLP GFHTYLNIPV AFFSKHVEGS NDHIKTAKLR TDASAKTWLV 60 EMDGLKLTDG WEDFAVAHDL RIGDIIIFRH EGKMVFHVTA FGPSLCEFQY TSASSHNIND 120 VSDDDHTNKT VTGNSSGEKR KRVKKNPRTK EESSSDHSHF VAHVTPSSLS CDRLYVPKGF 180 AMSNGLDNMS GKEIVLLNEE GKSWNLNITY NESGMHTFVR PGWRRFCAEN GISQGHHCTF 240 ELVRKSAPPV LRLSRAEHDP KPAPESSLHH SYYVGSASSN SLRIDKLYLQ MKFVTANGMK 300 KGFSEIILKN EWGGRWSVRL RQYASSNRTY LGPGWKTFCQ VNGIKAGDPF MFKLVETGDK 360 PVLLLCSSNR GETPLECSDD VNSLSSDTSS GEESQESEEE SLEDDSRSKD CVEMEKRKSS 420 LRCKCSSSYS KHRFVRLTLT QNALKTSVQH LPLGFTRVNG INRSRKIMLL GKDGVKKWVV 480 DLLKNKSTGA MRIRKGWREL CDAHGVKVGE SFLLELIRDE EAIPVLKFCT KL
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