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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
XP_009114284.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
|
| Family |
ERF |
| Protein Properties |
Length: 294aa MW: 33345.4 Da PI: 4.8685 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_009114284.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 64.9 | 1.6e-20 | 149 | 199 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+++AeIrdp+++g r++lg+f++a eAa+a+++a+ +l+g
XP_009114284.1 149 HYRGVRQRP-WGKFAAEIRDPNKRG--SRIWLGTFDSAIEAARAYDQAAFRLRG 199
8********.**********96655..*************************98 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009409 | Biological Process | response to cold |
| GO:0010200 | Biological Process | response to chitin |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 294 aa
Download sequence Send
to blast |
MANPSEASAL RFIEKHLLDE LSPVATDRWM IHESAATESS SDSSPTIFGS PAAPIEFSEF 60
ENKPEIIDLS TPRLISSPFE FDSEVSVSDF DFKPSYQTGN QFEPEIKTQS NRNPPSLKIS 120
VPTKTEWIQF DPQPEVTKPK QAIAEEKKHY RGVRQRPWGK FAAEIRDPNK RGSRIWLGTF 180
DSAIEAARAY DQAAFRLRGS KAILNFPLEV GKWKTRSDAD GEKKRKRDDE LEDVTVVEKV 240
LKTEQNVDGK ETFPLVKSDL TELYDWDLTG FLNFPLLSPL SPRPSFNYSE LTVV
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. {ECO:0000269|PubMed:10715325, ECO:0000269|PubMed:9756931}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Ethylene induction is completely dependent on a functional ETHYLENE-INSENSITIVE2 (EIN2). Wounding as well as cold stress induction does not require EIN2. Transcripts accumulate strongly in cycloheximide-treated plants, a protein synthesis inhibitor. Seems to not be influenced by jasmonate, Alternaria brassicicola, exogenous abscisic acid (ABA), cold, heat, NaCl or drought stress. {ECO:0000269|PubMed:10715325}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC155347 | 0.0 | AC155347.1 Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrH093K03, complete sequence. |
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT5G47230.1 | 1e-126 | ethylene responsive element binding factor 5 |
