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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009113332.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Family | bZIP | ||||||||
Protein Properties | Length: 373aa MW: 42253.8 Da PI: 9.5121 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 21.9 | 3.9e-07 | 240 | 276 | 17 | 53 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 A+rsR RK+++i eLe+ v++L+ae ++ l+ l+ XP_009113332.1 240 AQRSRVRKLQYISELERTVQALQAEGSKVSADLDFLN 276 89***********************988777777665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 3.0E-5 | 224 | 299 | No hit | No description |
CDD | cd14703 | 2.21E-14 | 232 | 279 | No hit | No description |
SuperFamily | SSF57959 | 2.36E-5 | 240 | 282 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 373 aa Download sequence Send to blast |
MASSKGTQSV KDLMHPGKNA LLPPKIPFPT VSAPYSEYIP LGSRPHGHKL NDEKPHHHHH 60 HQRTSSESDL VEEPPFWLDD LLNEPESPVR KCGHRRSSSD SYAYLDMANA KNISLTLQND 120 FSYRNTGSST QRGGVHELDW NQNAAFYSDS NFLNQTNRQR DSLVAASGPR PSWQPFTRES 180 VGGKHMGSSS YMPQEAPETK NYAKTLSHDA KKFSPEQKHS NAQPVTCDAD NTRRAKQQFA 240 QRSRVRKLQY ISELERTVQA LQAEGSKVSA DLDFLNQRNL ILSMENKALK QRLESIAQEK 300 LIKQMEQELL EKEIGRLRAL YQQQQQQQTQ QPPASHKRAS SKDLDSQFSS LSLNSKDSNS 360 SRDSVSVTSQ FHF |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_009113332.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009113332.1 | 0.0 | PREDICTED: uncharacterized protein At4g06598-like | ||||
TrEMBL | M4EGH1 | 0.0 | M4EGH1_BRARP; Uncharacterized protein | ||||
STRING | Bra027885.1-P | 0.0 | (Brassica rapa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM3360 | 24 | 44 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G58110.2 | 1e-164 | bZIP family protein |