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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009112576.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Family |
M-type_MADS |
Protein Properties |
Length: 342aa MW: 39171.2 Da PI: 9.4392 |
Description |
M-type_MADS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009112576.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SRF-TF | 61.2 | 1.2e-19 | 23 | 68 | 6 | 51 |
HHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
SRF-TF 6 ksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
+s + +++kR+ +++KKAeELS+LC++ev+vi ++s+g l+++++
XP_009112576.1 23 SSLKAASLAKRQVTVFKKAEELSILCGVEVSVICYGSDGALRTWPK 68
677889**************************************96 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 342 aa
Download sequence Send
to blast |
MSSSLSKTTK VSQFRPTLFQ KASSLKAASL AKRQVTVFKK AEELSILCGV EVSVICYGSD 60 GALRTWPKDR EKVKDMAVRY SQLSEVKRRI KQWDLNKFLE EVNKDPKKKN KKKKVKLESS 120 YKYPDWDPRF GNCSVEQLTE LIESLERKQT IMQDRLRAVL ESQRQRNMYY MNMAEPTQMN 180 HLQQQLPNQD QSLAPLPNSL TVYQYPNMDM YSSFLGGQET GRNEFLSTNM IPNNSFNSNC 240 VYMFQNQFNQ NCSKVEDYSG FPQGTGINNM NVEDYSGSLR AQGPNGLQNM DLQGYNNNSI 300 NTNGFSHQLV QFPAQRAAPA CQYVDGSTQN IRPQFQYSSF VG
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that may function in the maintenance of the proper function of the central cell in pollen tube attraction. {ECO:0000305|PubMed:26462908}. |