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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009112503.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Family |
B3 |
Protein Properties |
Length: 248aa MW: 28131 Da PI: 5.3192 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009112503.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 49.1 | 1e-15 | 17 | 93 | 11 | 95 |
HHTT-EE--HHH.HTT.---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
B3 11 lksgrlvlpkkfaeeh.ggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95
+ ++ +++p +f+++h + k+++k+ +l++ s ++Wev ++++ lt+GWk+F a++L+ gD++vFk++g++ f +v+
XP_009112503.1 17 F-HNGVTIPLSFFSQHiQ-GKTNGKKWKLRSdASDQTWEVIQ--EGRR----LTGGWKDFTTAHDLRIGDILVFKHEGDMVF--HVT 93
3.5569**********64.4567889999987899*****99..8887....***********************9999988..766 PP
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2 | B3 | 56.8 | 3.9e-18 | 130 | 223 | 4 | 98 |
E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
B3 4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
+++++++ +++ l+l + ++ ++k + k+++l +++g+sW+ l+y+ +++++++kGW+eF+++n gD +vF ++g+ ++++++ v+
XP_009112503.1 130 AEVTASNINEDKLYLLVEATTCTALNK-QLKEIILVNKEGNSWTASLRYSEADDMFYIRKGWREFCEENICTIGDLFVFNVVGDGNTTPLMCVCP 223
567888888999999999884447776.668*****************************************************99999999996 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 248 aa
Download sequence Send
to blast |
MGNPQEPHFL KPLLPGFHNG VTIPLSFFSQ HIQGKTNGKK WKLRSDASDQ TWEVIQEGRR 60 LTGGWKDFTT AHDLRIGDIL VFKHEGDMVF HVTPFGPSCC EIQFTHPHSI KEEADVDDTH 120 SFSFDYCFLA EVTASNINED KLYLLVEATT CTALNKQLKE IILVNKEGNS WTASLRYSEA 180 DDMFYIRKGW REFCEENICT IGDLFVFNVV GDGNTTPLMC VCPERKECSE LLIKHLSIMN 240 GDLLLAHG
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC232550 | 0.0 | AC232550.1 Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrH011J16, complete sequence. |