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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
XP_009112062.1 |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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| Family |
bZIP |
| Protein Properties |
Length: 388aa MW: 42289.2 Da PI: 10.2142 |
| Description |
bZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_009112062.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | bZIP_1 | 41.2 | 3.6e-13 | 310 | 363 | 5 | 58 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58
+r+rr++kNRe+A rsR+RK+a++ eLe ++++L++ N++L+k+ e+ ++ ++
XP_009112062.1 310 RRQRRMIKNRESAARSRARKQAYTLELEAEIEKLKKVNQELQKKQAEMMEMQKN 363
69***************************************9988777777654 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 388 aa
Download sequence Send
to blast |
MGTHVNFNNL GGGGGGEGSN QMKPTDNAYP LARQSSLYSL TFDELQSTLL GGPGKDFGSM 60
NMDELLKSIW TAEEAQAMTM NPSSTATAVA QPGGGIPLQR QGSLTLPRTI SQKTVDEVWK 120
CLFTKDGNMV GSSGGGSESN APQRQQTLGE ITLEEFLLRA GVVREDNNNN NGFYSNNGGL 180
GFGFGQPNQN NISFNNGTND SMILKQPPHQ QFQQQLQPRQ QLNQPPHPPP HQRMPQTIFP 240
KQANVAFAGA GNNAGNNNNN GLGSFGGGGV TVAATSPGTS SAENNSLSPV PYVLNRGRRS 300
NTGLEKVIER RQRRMIKNRE SAARSRARKQ AYTLELEAEI EKLKKVNQEL QKKQAEMMEM 360
QKNELKESSK QPWGSKRQCL RRTLTGPW
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in roots, leaves, flowers and immatures siliques. {ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:11884679}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:11884679, ECO:0000269|PubMed:15361142, ECO:0000269|PubMed:16463099}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA) and cold. {ECO:0000269|PubMed:10636868, ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:16284313, ECO:0000269|PubMed:16463099}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | JX122894 | 0.0 | JX122894.1 Brassica napus ABA-responsive element binding factor 4 (ABF4.1) mRNA, complete cds. |
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT1G49720.1 | 1e-107 | abscisic acid responsive element-binding factor 1 |
| Publications
? help Back to Top |
- Gao S, et al.
ABF2, ABF3, and ABF4 Promote ABA-Mediated Chlorophyll Degradation and Leaf Senescence by Transcriptional Activation of Chlorophyll Catabolic Genes and Senescence-Associated Genes in Arabidopsis.
Mol Plant, 2016. 9(9): p. 1272-1285
[PMID:27373216] - Fernando VCD,Al Khateeb W,Belmonte MF,Schroeder DF
Role of Arabidopsis ABF1/3/4 during det1 germination in salt and osmotic stress conditions.
Plant Mol. Biol., 2018. 97(1-2): p. 149-163
[PMID:29680877] - Muñiz García MN,Cortelezzi JI,Fumagalli M,Capiati DA
Expression of the Arabidopsis ABF4 gene in potato increases tuber yield, improves tuber quality and enhances salt and drought tolerance.
Plant Mol. Biol., 2018. 98(1-2): p. 137-152
[PMID:30143991]
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