|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
XP_009111967.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
|
Family |
B3 |
Protein Properties |
Length: 240aa MW: 27390.1 Da PI: 6.3898 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009111967.1 | genome | NCBI | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 43.8 | 4.6e-14 | 10 | 93 | 2 | 95 |
EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
B3 2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95
fk l + sg + +p +f ++h g + +k +l++ s + Wev +++ +ltkGWkeF +a++L+ gD+v+Fk++g++ f +v+
XP_009111967.1 10 FKPL--LPGFHSG-VAIPLDFYSKHiqGAE--INKPWKLRSdASDQIWEVIR--EGR----TLTKGWKEFTEAHDLRIGDIVIFKHEGDMVF--HVT 93
5666..4555555.99*********86433..4445666654999****988..555....4***********************9999988..766 PP
|
2 | B3 | 65.7 | 6.8e-21 | 121 | 214 | 4 | 98 |
E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
B3 4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
+++++ + k + + lp + + ++g +++ k+++l +++g+sW+ ++ ++ ++g+y++++GW++F+++n+ gD +vF ++g+ ++++++ v+
XP_009111967.1 121 AEVTPTNQKDDKMFLPVEAM-RCGALNQQCKEVKLVNKEGKSWTARFGFSESDGAYYISRGWRKFCRDNRCTNGDLFVFNVVGDGTTTPLLCVCP 214
5678999999*********9.7755556779*****************************************************9999*999996 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 240 aa
Download sequence Send
to blast |
METPREPHFF KPLLPGFHSG VAIPLDFYSK HIQGAEINKP WKLRSDASDQ IWEVIREGRT 60 LTKGWKEFTE AHDLRIGDIV IFKHEGDMVF HVTPFGPSCC EILWSDADDA PTFSYDYCFL 120 AEVTPTNQKD DKMFLPVEAM RCGALNQQCK EVKLVNKEGK SWTARFGFSE SDGAYYISRG 180 WRKFCRDNRC TNGDLFVFNV VGDGTTTPLL CVCPERKECT ELLIKHFSRI DGSIASTSRN
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AC232495 | 0.0 | AC232495.1 Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB051M06, complete sequence. |