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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009110111.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Family |
B3 |
Protein Properties |
Length: 312aa MW: 35273.2 Da PI: 8.5522 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009110111.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 45 | 1.9e-14 | 83 | 159 | 11 | 95 |
HHTT-EE--HHH.HTT.---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
B3 11 lksgrlvlpkkfaeeh.ggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95
++++ l++p f+++h +gk +++ t tl++ ++W+v + ++ lt+GWkeF++a++L+ gD+v+Fkl+g++ f +v+
XP_009110111.1 83 FQTH-LTIPIVFFSKHiQGK-TNGNTWTLTSdAMDQTWQVIQ--EERR----LTRGWKEFAEAHDLRIGDIVIFKLKGSMVF--HVT 159
5566.9**********7555.56668888874777*****99..7777....************************998888..665 PP
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2 | B3 | 56.6 | 4.8e-18 | 199 | 293 | 2 | 98 |
EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
B3 2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96
fk++++ ++ +++ l lp + + ++ke+ k+ +l + +g+ W+v ++++ ++g y+++ GW++F+ +n+ gD++vF ++g+ ++ +++ v
XP_009110111.1 199 FKAEVTDSNVREDKLNLPVGATGCNALNKEC-KKAKLVNIEGKAWNVSMRFNESGGFYYIK-GWRKFCAENKCHIGDSFVFNVVGDGNTLPLMCV 291
78999999999999*******9888999877.6*****************99999999998.***********************9877799888 PP
E- CS
B3 97 fr 98
++
XP_009110111.1 292 CS 293
87 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 312 aa
Download sequence Send
to blast |
MVPIPYLKSP NQTRFPLIFG KPFPLSTLRR HNRGRSPLPP PATANSTEEE TPDQQRPIPP 60 IATQPKMVQP QEPHFFQPLL PGFQTHLTIP IVFFSKHIQG KTNGNTWTLT SDAMDQTWQV 120 IQEERRLTRG WKEFAEAHDL RIGDIVIFKL KGSMVFHVTP FGPSCCDIQY TYPNSMEEAH 180 DHQNNRTGAR FSYSWDYCFK AEVTDSNVRE DKLNLPVGAT GCNALNKECK KAKLVNIEGK 240 AWNVSMRFNE SGGFYYIKGW RKFCAENKCH IGDSFVFNVV GDGNTLPLMC VCSPSKECLK 300 SAGDIASSSR VN
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Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AC189599 | 1e-167 | AC189599.2 Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrH014H10, complete sequence. |