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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009109260.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Family |
bZIP |
Protein Properties |
Length: 262aa MW: 29448.9 Da PI: 10.9238 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009109260.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 47.9 | 2.9e-15 | 193 | 244 | 5 | 56 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56
+r +r++kNRe+A rsR+RK+a++ eLe k + L+aeN +Lk + ++lk +
XP_009109260.1 193 RRHKRMIKNRESAARSRARKQAYTNELELKLAHLKAENARLKRQQDQLKMVA 244
699********************************************99655 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009911 | Biological Process | positive regulation of flower development |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:2000028 | Biological Process | regulation of photoperiodism, flowering |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0043621 | Molecular Function | protein self-association |
Sequence ? help Back to Top |
Protein Sequence Length: 262 aa
Download sequence Send
to blast |
MFSSAKHQRN HRVSAPNKNK ILNKVPSISS SSSPSHSQVQ KRSLITMEEV WKDINLASIH 60 HLNHHSQHPQ HNHEPRFRSH NQNPNSIFQD FLNRPLNQEP TIPTSLSGDT TTVTALFSSS 120 PLAPPATVLS LNSSACFEFL DNEDPLVTPN SNLHSHNHLT NVCSLDTPFE ALVTSTSFGK 180 KRGQESNEGS GNRRHKRMIK NRESAARSRA RKQAYTNELE LKLAHLKAEN ARLKRQQDQL 240 KMVAANQQPK KNALQRSSTA PF
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Highly expressed in shoot apex. {ECO:0000269|PubMed:16099979, ECO:0000269|PubMed:16099980, ECO:0000269|PubMed:25661797}. |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor required for the transition to flowering promoted by FT. {ECO:0000269|PubMed:16099979, ECO:0000269|PubMed:16099980}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AB105818 | 1e-149 | AB105818.1 Arabidopsis thaliana FD mRNA for bZIP transcription factor, complete cds, cultiva:Columbia. |
GenBank | AB105819 | 1e-149 | AB105819.1 Arabidopsis thaliana FD mRNA for bZIP transcription factor, complete cds, cultiva:Landsberg erecta. |
Publications
? help Back to Top |
- Ho WW,Weigel D
Structural features determining flower-promoting activity of Arabidopsis FLOWERING LOCUS T. Plant Cell, 2014. 26(2): p. 552-64 [PMID:24532592] - Ji H, et al.
Downregulation of leaf flavin content induces early flowering and photoperiod gene expression in Arabidopsis. BMC Plant Biol., 2014. 14: p. 237 [PMID:25201173] - Li L, et al.
Expression of turtle riboflavin-binding protein represses mitochondrial electron transport gene expression and promotes flowering in Arabidopsis. BMC Plant Biol., 2014. 14: p. 381 [PMID:25547226] - Sussmilch FC, et al.
Pea VEGETATIVE2 Is an FD Homolog That Is Essential for Flowering and Compound Inflorescence Development. Plant Cell, 2015. 27(4): p. 1046-60 [PMID:25804541] - Khan M, et al.
Repression of Lateral Organ Boundary Genes by PENNYWISE and POUND-FOOLISH Is Essential for Meristem Maintenance and Flowering in Arabidopsis. Plant Physiol., 2015. 169(3): p. 2166-86 [PMID:26417006] - Andrés F, et al.
Floral Induction in Arabidopsis by FLOWERING LOCUS T Requires Direct Repression of BLADE-ON-PETIOLE Genes by the Homeodomain Protein PENNYWISE. Plant Physiol., 2015. 169(3): p. 2187-99 [PMID:26417007] - Kawamoto N,Endo M,Araki T
Expression of a kinase-dead form of CPK33 involved in florigen complex formation causes delayed flowering. Plant Signal Behav, 2015. 10(12): p. e1086856 [PMID:26440648] - Zhang L,Yu H,Lin S,Gao Y
Molecular Characterization of FT and FD Homologs from Eriobotrya deflexa Nakai forma koshunensis. Front Plant Sci, 2016. 7: p. 8 [PMID:26834775] - Hou CJ,Yang CH
Comparative analysis of the pteridophyte Adiantum MFT ortholog reveals the specificity of combined FT/MFT C and N terminal interaction with FD for the regulation of the downstream gene AP1. Plant Mol. Biol., 2016. 91(4-5): p. 563-79 [PMID:27216814] - Jung JH,Lee HJ,Ryu JY,Park CM
SPL3/4/5 Integrate Developmental Aging and Photoperiodic Signals into the FT-FD Module in Arabidopsis Flowering. Mol Plant, 2016. 9(12): p. 1647-1659 [PMID:27815142] - Jang S,Li HY,Kuo ML
Ectopic expression of Arabidopsis FD and FD PARALOGUE in rice results in dwarfism with size reduction of spikelets. Sci Rep, 2017. 7: p. 44477 [PMID:28290557]
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