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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009108912.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Family |
B3 |
Protein Properties |
Length: 393aa MW: 45373.2 Da PI: 9.9941 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009108912.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 56.2 | 6.2e-18 | 23 | 97 | 12 | 94 |
HTT-EE--HHH.HTT.---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
B3 12 ksgrlvlpkkfaeeh.ggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94
++ l++p f+++h +gk + +kt++l++ +s r+Wevk+ ++++ lt+GW++F+ka++L+ gD+++Fk++g++ f v
XP_009108912.1 23 DTH-LTIPFAFFSKHiQGK-TMKKTVKLRSyTSDRTWEVKI--DGRR----LTRGWNDFAKAHDLRIGDIIIFKHEGDMAF--SV 97
555.9**********6544.6778******8999*******..9998....************************999988..44 PP
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2 | B3 | 68.1 | 1.2e-21 | 156 | 250 | 3 | 98 |
EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
B3 3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97
++++++lk++ l+lp ++ ++k+++ +++l +++g+sW+ l++r ++g+y++++GW++F+ +n+ k+gD +vF l+g+ ++++++ v+
XP_009108912.1 156 VSEVTASNLKLDTLYLPVGARSSSALNKRCH-EMILVNKEGNSWTASLKFRESGGMYYIRRGWRRFCLDNRRKVGDLFVFNLVGDGKTTPMMCVC 249
567899*************999999999886.*****************************************************9999**9999 PP
- CS
B3 98 r 98
XP_009108912.1 250 P 250
6 PP
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3 | B3 | 39.2 | 1.3e-12 | 288 | 385 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE.....EEETTEEEE-TTHHHHHHHHT-.-TT-EEEEEE-SSSEE. CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy...rkksgryvltkGWkeFvkangL.kegDfvvFkldgrsefe 91
f++++++ +++ s+ ++lp f++ +g++k k+++l+d++g + kl +++ l+kGWk F++an++ k g+++v++l++ +++
XP_009108912.1 288 FLTITLTRYNFISSKFILPIAFTNINGLNK--YKEIILMDKHGVKRLTKLVQdgpHNNR--RGLGKGWKLFCEANDVfKIGESFVLELVW-EDTV 377
7788889999999**********8889995..569***************777554444..45*************846***********.7888 PP
.EEEEE-S CS
B3 92 lvvkvfrk 99
+v+k+++k
XP_009108912.1 378 PVLKFCSK 385
9**99987 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 393 aa
Download sequence Send
to blast |
MVNPPLQSPT NPHFFQPLLP GFDTHLTIPF AFFSKHIQGK TMKKTVKLRS YTSDRTWEVK 60 IDGRRLTRGW NDFAKAHDLR IGDIIIFKHE GDMAFSVTPF GPSCCEFQYT QSHIIKKEAD 120 IDDDDEDDNE RQYKIRNGLK PKTEPMSSYS FDYCFVSEVT ASNLKLDTLY LPVGARSSSA 180 LNKRCHEMIL VNKEGNSWTA SLKFRESGGM YYIRRGWRRF CLDNRRKVGD LFVFNLVGDG 240 KTTPMMCVCP EEECSELVSK HLSRGRRSRK TKKRSKWVAS SSSRRNRFLT ITLTRYNFIS 300 SKFILPIAFT NINGLNKYKE IILMDKHGVK RLTKLVQDGP HNNRRGLGKG WKLFCEANDV 360 FKIGESFVLE LVWEDTVPVL KFCSKVKVET VDV
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