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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
XP_009107316.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Family |
ARR-B |
Protein Properties |
Length: 449aa MW: 51193.7 Da PI: 5.1862 |
Description |
ARR-B family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009107316.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | G2-like | 67.5 | 2.2e-21 | 251 | 308 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilel...mkvkgLtlehvkSHLQkYRl 55
+pr+ Wt +L ++F+ea++ GG++kA Pk +l++ m+++gLt+++v SHLQkYRl
XP_009107316.1 251 RPRISWTGDLQQKFLEAIDIVGGPKKASPKVLLKClhdMNIEGLTRNNVSSHLQKYRL 308
59****************************998765559******************8 PP
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2 | Response_reg | 54.3 | 7.3e-19 | 36 | 141 | 1 | 107 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH..HHHHESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS
Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealell..kekdpDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93
vl+vd + + + +++++e+ y +v++ +d+eea++ l +++++++++ D mpg++Gl++l i ++ +lp++++++ ++ e + +a+ G
XP_009107316.1 36 VLVVDANLSTLLDMKEIMERCAY-HVTAYADAEEAIAFLtkCKHEINIVIWDYHMPGINGLQALAIIGSKM-DLPVVIMSGDDQTESVMNAMVHG 128
899999999**************.***************666677**********************6654.8********************** PP
ESEEEESS--HHHH CS
Response_reg 94 akdflsKpfdpeel 107
a +++Kp+ +e +
XP_009107316.1 129 ACHCVMKPVRKE-I 141
********7655.3 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 449 aa
Download sequence Send
to blast |
MSIAHITEDG DKALFLQQET SEINSPLNEF PPSTNVLVVD ANLSTLLDMK EIMERCAYHV 60 TAYADAEEAI AFLTKCKHEI NIVIWDYHMP GINGLQALAI IGSKMDLPVV IMSGDDQTES 120 VMNAMVHGAC HCVMKPVRKE IIATIWQHIV RKRMMSKPGL VPPVVVHGDY SKQEKDDSVT 180 VDQDDSEESI DKIEEKATQK QTMICIEETQ PMQSHLVKSN GSDQDDDDSR SVRNYNYEQS 240 IDKKKERDLK RPRISWTGDL QQKFLEAIDI VGGPKKASPK VLLKCLHDMN IEGLTRNNVS 300 SHLQKYRLSL EETKIPQQFP ETGWSSLSRP SPFLGMNNGF IAPTSLRNGP AVYPVQDNQY 360 QNGYLAINNN QFVTNNMHGF PYSENDHHLQ QQHQQRQYQL SNQMMNYMMR NEPQQAYNSI 420 GLTDLEPNIY PSLPYYPNEF LFDGYNFSN
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