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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009106704.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Family |
GRAS |
Protein Properties |
Length: 608aa MW: 65530.6 Da PI: 5.4232 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009106704.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 358.4 | 1.1e-109 | 229 | 608 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96
++++le+A+a+++g++e a+++Lar+s++ s+++++ ++l+ +++ AL++r++ ++ p++e +e++ +++l++e+sP++k++++
XP_009106704.1 229 RQTVLEIATAIAEGKTEIASEILARVSQTPSQRRNSEEKLVDFMVTALRSRINP----AESSAPATEL---YGKEHIVSTQLLYELSPCFKLGFM 316
6889*************************************************9....3333344444...49********************** PP
GRAS 97 taNqaIleavege....ervHiiDfdisqGlQWpaLlqaLasRp.egpp.slRiTgvgspesg.......skeeleetgerLakfAeelgvpfef 178
+aN aIl+a ++ + H+iDf+i++G+Q++ Ll+aL++R+ ++ p +RiT+v + + g +e+l+++g+rL+++ + lg++++f
XP_009106704.1 317 AANLAILDASGNKnddgTSFHVIDFEIGEGGQYVHLLHALSTRRsGKNPlVVRITAVTNISDGfsvagqrGEERLRTIGDRLSELSDGLGISLKF 411
*********99988887889*********************9985444459********9988999999999*********************** PP
GRAS 179 nvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdslea 273
nv++ rl+dl+ e+L ++p+E laVnl+++l+r++desv++e++rde+L+ vk+l+P vv++ve+e++ n+++Fl r++e++ +y al+ds+e+
XP_009106704.1 412 NVVAGLRLSDLSRESLGCHPDEPLAVNLAFKLYRVPDESVCMENPRDELLRRVKGLNPSVVTLVEEEMNSNTAPFLGRVSESCACYGALLDSVES 506
**9888***************************************************************************************** PP
GRAS 274 klpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk..sdgyrveeesgslvlgWkdrp 366
++p+ ++r+kvE+ +gr++ n+vaceg +r+er+e ++kWr+r+++aGF+ +plsek+a+++k+ l++ + g++v+ee+g +++gW++r+
XP_009106704.1 507 TVPSSYSDRAKVEEG-IGRKLINAVACEGIDRIERCEVFGKWRMRMSMAGFELMPLSEKIAESMKSRLSNGNrvHPGFTVKEENGGVCFGWMGRT 600
***************.**************************************************9998777789******************* PP
GRAS 367 LvsvSaWr 374
L ++SaWr
XP_009106704.1 601 LAVASAWR 608
*******8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 608 aa
Download sequence Send
to blast |
MASGFPGGGG GPEFYGVGGR SMPGGPINNN PQIPGIFLDQ IGNRISSGNG IAGKRTLADF 60 QQQSFHNQAA INAFLLRSVK PRNLQSPAID MSSFGGSSQR YGSPSFLPNL RFQTQQQPDY 120 TGIRMGIGSG NQTLSGVPCI EPVQNVNRAE ESENMLNSLR ELEKQLLDDD DAQGGDDDVS 180 VITHSNSNSD WLHGLVTPNP NPVLSSSPSS SSSSSSPSTA STTTSVCSRQ TVLEIATAIA 240 EGKTEIASEI LARVSQTPSQ RRNSEEKLVD FMVTALRSRI NPAESSAPAT ELYGKEHIVS 300 TQLLYELSPC FKLGFMAANL AILDASGNKN DDGTSFHVID FEIGEGGQYV HLLHALSTRR 360 SGKNPLVVRI TAVTNISDGF SVAGQRGEER LRTIGDRLSE LSDGLGISLK FNVVAGLRLS 420 DLSRESLGCH PDEPLAVNLA FKLYRVPDES VCMENPRDEL LRRVKGLNPS VVTLVEEEMN 480 SNTAPFLGRV SESCACYGAL LDSVESTVPS SYSDRAKVEE GIGRKLINAV ACEGIDRIER 540 CEVFGKWRMR MSMAGFELMP LSEKIAESMK SRLSNGNRVH PGFTVKEENG GVCFGWMGRT 600 LAVASAWR
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed in seedlings, roots, leaves and siliques. {ECO:0000269|PubMed:10341448, ECO:0000269|PubMed:18500650}. |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |